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Chlorine in PDB 4dxv: Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution

Enzymatic activity of Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution

All present enzymatic activity of Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution:
4.2.1.52;

Protein crystallography data

The structure of Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution, PDB code: 4dxv was solved by M.Kumar, S.Kaushik, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.24 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.350, 122.470, 52.330, 90.00, 115.92, 90.00
R / Rfree (%) 15.2 / 19.9

Other elements in 4dxv:

The structure of Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution (pdb code 4dxv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution, PDB code: 4dxv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4dxv

Go back to Chlorine Binding Sites List in 4dxv
Chlorine binding site 1 out of 2 in the Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:21.9
occ:1.00
 O A:HOH681 3.0 16.3 1.0
O A:HOH499 3.0 14.4 1.0
NZ A:LYS161 3.1 11.6 1.0
O A:HOH653 3.2 36.4 1.0
CD2 A:LEU101 3.4 14.6 1.0
N A:THR44 3.9 9.7 1.0
CA A:GLY43 3.9 11.3 1.0
CG1 A:VAL40 4.0 8.2 1.0
CB A:ALA8 4.0 9.9 1.0
CE2 A:TYR133 4.2 17.4 1.0
CG2 A:ILE203 4.2 8.7 1.0
OG1 A:THR44 4.3 20.7 1.0
CE A:LYS161 4.4 13.2 1.0
C A:GLY43 4.4 11.4 1.0
OH A:TYR133 4.5 23.4 1.0
CD A:LYS161 4.6 10.6 1.0
O A:HOH426 4.6 15.0 1.0
CZ A:TYR133 4.6 18.0 1.0
CB A:VAL40 4.6 9.3 1.0
CB A:THR44 4.7 12.7 1.0
O A:HOH644 4.8 32.9 1.0
CD2 A:TYR133 4.8 15.2 1.0
N A:THR45 4.8 9.6 1.0
CA A:THR44 4.9 11.1 1.0
CA A:ALA8 4.9 9.5 1.0
CG A:LEU101 4.9 10.4 1.0
CG2 A:VAL40 4.9 9.8 1.0

Chlorine binding site 2 out of 2 in 4dxv

Go back to Chlorine Binding Sites List in 4dxv
Chlorine binding site 2 out of 2 in the Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:22.1
occ:1.00
 O B:HOH450 2.9 16.3 1.0
NZ B:LYS161 3.0 8.3 1.0
O B:HOH478 3.1 14.1 1.0
O B:HOH614 3.1 34.9 1.0
CD2 B:LEU101 3.5 15.7 1.0
CB B:ALA8 4.0 9.7 1.0
CG1 B:VAL40 4.0 8.9 1.0
N B:THR44 4.0 11.8 1.0
CA B:GLY43 4.0 12.5 1.0
CG2 B:ILE203 4.2 6.5 1.0
CE2 B:TYR133 4.2 14.2 1.0
CE B:LYS161 4.3 9.9 1.0
OG1 B:THR44 4.4 20.6 1.0
C B:GLY43 4.5 12.3 1.0
O B:HOH480 4.5 14.6 1.0
CD B:LYS161 4.6 7.5 1.0
CB B:VAL40 4.7 10.1 1.0
CZ B:TYR133 4.8 16.1 1.0
CD2 B:TYR133 4.8 15.2 1.0
CB B:THR44 4.8 14.0 1.0
OH B:TYR133 4.8 23.1 1.0
CA B:ALA8 4.9 9.5 1.0
CG B:LEU101 4.9 9.4 1.0
N B:THR45 5.0 9.8 1.0

Reference:

M.Kumar, S.Kaushik, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of Dihydrodipicolinate Synthase From Acinetobacter Baumannii Complexed with Mg and Cl Ions at 1.80 A Resolution To Be Published.
Page generated: Sun Jul 21 12:22:18 2024

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