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Chlorine in PDB 4e7v: The Structure of R6 Bovine Insulin

Protein crystallography data

The structure of The Structure of R6 Bovine Insulin, PDB code: 4e7v was solved by P.Harris, C.G.Frankaer, M.V.Knudsen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.88 / 1.80
Space group H 3 1
Cell size a, b, c (Å), α, β, γ (°) 156.240, 156.240, 78.880, 90.00, 90.00, 120.00
R / Rfree (%) 20.9 / 27.2

Other elements in 4e7v:

The structure of The Structure of R6 Bovine Insulin also contains other interesting chemical elements:

Zinc (Zn) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of R6 Bovine Insulin (pdb code 4e7v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the The Structure of R6 Bovine Insulin, PDB code: 4e7v:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Chlorine binding site 1 out of 8 in 4e7v

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Chlorine binding site 1 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl102

b:20.4
occ:1.00
 ZN D:ZN101 2.2 21.1 1.0
NE2 L:HIS10 3.4 20.1 1.0
NE2 H:HIS10 3.5 20.3 1.0
NE2 D:HIS10 3.5 19.7 1.0
CD1 D:LEU6 3.7 25.1 1.0
CD1 H:LEU6 3.7 20.0 1.0
CB L:LEU6 3.7 18.7 1.0
CD1 L:LEU6 3.8 24.6 1.0
CB H:LEU6 3.8 20.9 1.0
CD2 L:HIS10 3.8 18.4 1.0
CB D:LEU6 3.8 18.7 1.0
CD2 H:HIS10 3.9 21.2 1.0
CD2 D:HIS10 3.9 19.6 1.0
CG L:LEU6 4.2 26.4 1.0
CG H:LEU6 4.2 27.7 1.0
CG D:LEU6 4.2 27.9 1.0
CE1 L:HIS10 4.6 23.6 1.0
CD2 L:LEU6 4.6 32.3 1.0
CE1 H:HIS10 4.6 20.5 1.0
CE1 D:HIS10 4.6 21.7 1.0
CD2 H:LEU6 4.6 25.3 1.0
CD2 D:LEU6 4.6 29.4 1.0
CA L:LEU6 4.8 19.0 1.0
O L:LEU6 4.8 23.5 1.0
O H:LEU6 4.8 21.8 1.0
O D:LEU6 4.8 22.6 1.0
CA H:LEU6 4.8 19.0 1.0
CA D:LEU6 4.9 20.0 1.0
C L:LEU6 4.9 22.4 1.0
C H:LEU6 4.9 19.6 1.0
C D:LEU6 5.0 20.7 1.0

Chlorine binding site 2 out of 8 in 4e7v

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Chlorine binding site 2 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl101

b:25.9
occ:1.00
 ZN B:ZN101 2.2 24.2 1.0
O B:HOH207 3.5 51.7 1.0
NE2 J:HIS10 3.5 22.8 1.0
NE2 F:HIS10 3.6 19.2 1.0
NE2 B:HIS10 3.6 23.3 1.0
CB J:LEU6 3.7 24.5 1.0
CB B:LEU6 3.8 27.8 1.0
CB F:LEU6 3.9 28.8 1.0
CD2 F:HIS10 3.9 21.9 1.0
CD1 J:LEU6 4.0 28.4 1.0
CD2 B:HIS10 4.0 18.1 1.0
CD2 J:HIS10 4.0 18.1 1.0
CD1 B:LEU6 4.2 38.7 1.0
CD1 F:LEU6 4.2 38.1 1.0
CG J:LEU6 4.4 33.3 1.0
CG F:LEU6 4.4 28.7 1.0
CG B:LEU6 4.5 29.9 1.0
CD2 F:LEU6 4.6 34.2 1.0
CE1 J:HIS10 4.6 33.3 1.0
CE1 B:HIS10 4.7 32.5 1.0
CE1 F:HIS10 4.7 25.1 1.0
O B:LEU6 4.8 24.8 1.0
CA J:LEU6 4.8 23.7 1.0
C B:LEU6 4.8 31.7 1.0
O J:LEU6 4.8 29.7 1.0
CA B:LEU6 4.9 24.9 1.0
CA F:LEU6 4.9 27.8 1.0
C J:LEU6 4.9 33.1 1.0
O F:LEU6 4.9 27.9 1.0
C F:LEU6 5.0 37.4 1.0

Chlorine binding site 3 out of 8 in 4e7v

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Chlorine binding site 3 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Cl102

b:21.1
occ:1.00
 ZN N:ZN101 2.1 18.9 1.0
NE2 R:HIS10 3.4 15.4 1.0
NE2 V:HIS10 3.4 17.1 1.0
NE2 N:HIS10 3.4 16.8 1.0
CB V:LEU6 3.8 21.3 1.0
CB N:LEU6 3.8 22.7 1.0
CB R:LEU6 3.8 22.5 1.0
CD2 R:HIS10 3.8 15.4 1.0
CD2 V:HIS10 3.9 17.1 1.0
CD1 N:LEU6 3.9 30.1 1.0
CD2 N:HIS10 3.9 17.7 1.0
CD1 R:LEU6 3.9 31.6 1.0
CD1 V:LEU6 4.0 29.3 1.0
CG R:LEU6 4.3 24.3 1.0
CG N:LEU6 4.3 26.5 1.0
CG V:LEU6 4.3 24.8 1.0
CE1 R:HIS10 4.4 28.7 1.0
CE1 N:HIS10 4.5 32.3 1.0
CE1 V:HIS10 4.5 29.5 1.0
CD2 V:LEU6 4.6 32.3 1.0
CD2 R:LEU6 4.6 30.4 1.0
CD2 N:LEU6 4.6 31.1 1.0
O V:LEU6 4.7 18.1 1.0
O R:LEU6 4.7 17.9 1.0
CA R:LEU6 4.8 18.2 1.0
CA V:LEU6 4.8 22.8 1.0
CA N:LEU6 4.8 19.1 1.0
O N:LEU6 4.8 16.3 1.0
C V:LEU6 4.9 20.1 1.0
C R:LEU6 4.9 17.1 1.0
C N:LEU6 4.9 17.3 1.0

Chlorine binding site 4 out of 8 in 4e7v

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Chlorine binding site 4 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Cl102

b:23.3
occ:1.00
 ZN P:ZN101 2.3 21.7 1.0
NE2 T:HIS10 3.6 23.2 1.0
NE2 X:HIS10 3.7 22.6 1.0
NE2 P:HIS10 3.8 21.7 1.0
CB P:LEU6 3.8 23.4 1.0
CB X:LEU6 3.8 22.7 1.0
CB T:LEU6 3.8 23.2 1.0
CD1 X:LEU6 3.9 26.6 1.0
CD2 T:HIS10 3.9 16.6 1.0
CD1 P:LEU6 4.0 32.1 1.0
CD2 P:HIS10 4.1 23.3 1.0
CD2 X:HIS10 4.1 21.6 1.0
CD1 T:LEU6 4.2 29.4 1.0
CG P:LEU6 4.3 32.7 1.0
CG X:LEU6 4.4 29.2 1.0
CD2 P:LEU6 4.4 30.8 1.0
CG T:LEU6 4.6 28.4 1.0
CA P:LEU6 4.8 17.1 1.0
O P:LEU6 4.8 19.0 1.0
CE1 X:HIS10 4.8 26.0 1.0
CE1 T:HIS10 4.8 21.8 1.0
C P:LEU6 4.8 22.5 1.0
CA X:LEU6 4.9 20.1 1.0
C T:LEU6 4.9 19.1 1.0
CA T:LEU6 4.9 19.4 1.0
O T:LEU6 4.9 17.0 1.0
CE1 P:HIS10 4.9 27.8 1.0
O X:HOH101 4.9 39.8 1.0
C X:LEU6 4.9 23.8 1.0
O X:LEU6 5.0 21.9 1.0

Chlorine binding site 5 out of 8 in 4e7v

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Chlorine binding site 5 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
Z:Cl102

b:24.6
occ:0.33
 ZN Z:ZN101 2.1 20.0 0.3
NE2 Z:HIS10 3.4 19.6 1.0
CB Z:LEU6 3.8 20.9 1.0
CD2 Z:HIS10 3.9 19.5 1.0
CD1 Z:LEU6 4.0 33.0 1.0
CG Z:LEU6 4.3 27.6 1.0
CE1 Z:HIS10 4.5 31.3 1.0
CD2 Z:LEU6 4.6 31.8 1.0
CA Z:LEU6 4.8 20.0 1.0
O Z:LEU6 4.8 19.1 1.0
C Z:LEU6 4.9 20.6 1.0

Chlorine binding site 6 out of 8 in 4e7v

Go back to Chlorine Binding Sites List in 4e7v
Chlorine binding site 6 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
2:Cl102

b:29.6
occ:0.33
 ZN 2:ZN101 2.4 28.5 0.3
CB 2:LEU6 3.7 33.9 1.0
NE2 2:HIS10 3.8 27.4 1.0
CD1 2:LEU6 3.8 36.8 1.0
CD2 2:HIS10 4.1 26.9 1.0
CG 2:LEU6 4.3 39.1 1.0
O 2:HOH204 4.5 40.1 0.3
CD2 2:LEU6 4.7 33.3 1.0
CA 2:LEU6 4.8 31.8 1.0
C 2:LEU6 4.9 31.2 1.0
O 2:LEU6 4.9 28.3 1.0
CE1 2:HIS10 4.9 27.7 1.0

Chlorine binding site 7 out of 8 in 4e7v

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Chlorine binding site 7 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
4:Cl102

b:34.1
occ:0.33
 ZN 4:ZN101 2.4 33.8 0.3
NE2 4:HIS10 3.6 30.8 1.0
CB 4:LEU6 3.6 40.1 1.0
O 4:HOH203 3.7 52.9 0.3
CD1 4:LEU6 4.0 50.2 1.0
CD2 4:HIS10 4.0 31.2 1.0
CG 4:LEU6 4.4 46.1 1.0
O 4:LEU6 4.6 38.3 1.0
CA 4:LEU6 4.7 37.7 1.0
C 4:LEU6 4.7 40.6 1.0
CE1 4:HIS10 4.8 38.3 1.0
CD2 4:LEU6 4.9 45.9 1.0

Chlorine binding site 8 out of 8 in 4e7v

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Chlorine binding site 8 out of 8 in the The Structure of R6 Bovine Insulin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of The Structure of R6 Bovine Insulin within 5.0Å range:
probe atom residue distance (Å) B Occ
6:Cl102

b:23.6
occ:0.33
 ZN 6:ZN101 2.2 21.3 0.3
NE2 6:HIS10 3.5 23.4 1.0
CD1 6:LEU6 3.7 25.0 1.0
CB 6:LEU6 3.8 22.1 1.0
CD2 6:HIS10 3.9 23.0 1.0
CG 6:LEU6 4.2 34.4 1.0
CD2 6:LEU6 4.6 35.1 1.0
CE1 6:HIS10 4.6 25.7 1.0
CA 6:LEU6 4.8 22.1 1.0
O 6:LEU6 4.8 25.6 1.0
C 6:LEU6 4.9 18.8 1.0

Reference:

C.G.Frankar, M.V.Knudsen, K.Noren, E.Nazarenko, K.Stahl, P.Harris. The Structures of T(6), T(3)R(3) and R(6) Bovine Insulin: Combining X-Ray Diffraction and Absorption Spectroscopy. Acta Crystallogr.,Sect.D V. 68 1259 2012.
ISSN: ISSN 0907-4449
PubMed: 22993080
DOI: 10.1107/S090744491202625X
Page generated: Sun Jul 21 12:36:23 2024

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