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Chlorine in PDB 4efv: Crystal Structure of Oif From Llama Seminal Plasma

Protein crystallography data

The structure of Crystal Structure of Oif From Llama Seminal Plasma, PDB code: 4efv was solved by K.E.Van Straaten, Y.A.Leduc, M.H.Ratto, X.P.Valderrama, T.J.Delbaere, R.A.Pierson, G.P.Adams, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.83 / 2.32
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 108.930, 108.930, 49.830, 90.00, 90.00, 90.00
R / Rfree (%) 20.3 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Oif From Llama Seminal Plasma (pdb code 4efv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Oif From Llama Seminal Plasma, PDB code: 4efv:

Chlorine binding site 1 out of 1 in 4efv

Go back to Chlorine Binding Sites List in 4efv
Chlorine binding site 1 out of 1 in the Crystal Structure of Oif From Llama Seminal Plasma


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Oif From Llama Seminal Plasma within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:40.2
occ:1.00
O B:HOH306 2.5 44.6 1.0
N A:CYS110 3.3 48.1 1.0
N B:CYS110 3.4 46.5 1.0
CA A:VAL109 3.8 37.9 1.0
CA B:VAL109 3.9 39.5 1.0
CB A:CYS110 3.9 46.1 1.0
CB B:VAL109 4.0 36.1 1.0
C A:VAL109 4.0 48.0 1.0
CB A:VAL109 4.1 37.6 1.0
C B:VAL109 4.1 48.0 1.0
CB B:CYS110 4.2 46.5 1.0
CA A:CYS110 4.2 44.0 1.0
CB A:VAL14 4.3 44.5 1.0
CA B:CYS110 4.3 44.1 1.0
CB B:VAL14 4.3 48.1 1.0
CG1 B:VAL14 4.4 48.0 1.0
CG1 A:VAL14 4.6 46.0 1.0
O A:CYS110 4.7 42.6 1.0
O B:CYS110 4.7 43.4 1.0
O A:CYS108 4.7 40.7 1.0
CG1 B:VAL109 4.7 38.0 1.0
O B:CYS108 4.8 38.8 1.0
CG1 A:VAL109 4.9 36.5 1.0
C A:CYS110 4.9 43.8 1.0
CG2 B:VAL14 5.0 45.8 1.0
CG2 A:VAL14 5.0 42.0 1.0

Reference:

M.H.Ratto, Y.A.Leduc, X.P.Valderrama, K.E.Van Straaten, L.T.Delbaere, R.A.Pierson, G.P.Adams. The Nerve of Ovulation-Inducing Factor in Semen. Proc.Natl.Acad.Sci.Usa V. 109 15042 2012.
ISSN: ISSN 0027-8424
PubMed: 22908303
DOI: 10.1073/PNAS.1206273109
Page generated: Sat Dec 12 10:34:19 2020

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