Chlorine in PDB 4ejv: Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol

The structure of Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol, PDB code: 4ejv was solved by Y.M.Chang, C.K.M.Chen, A.H.J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.90
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	107.624, 107.624, 49.509, 90.00, 90.00, 120.00
R / Rfree (%)	24.7 / 29.5

The binding sites of Chlorine atom in the Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol (pdb code 4ejv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol, PDB code: 4ejv:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:47.6 occ:1.00 CL1 A:LCL201 0.0 47.6 1.0 C1 A:LCL201 1.8 48.9 1.0 C2 A:LCL201 2.8 49.2 1.0 OD1 B:ASN20 3.0 35.0 1.0 CL2 A:LCL201 3.0 46.5 1.0 C4 A:LCL201 3.0 51.9 1.0 OD1 A:ASN20 3.4 29.5 1.0 N2 A:LCL201 3.4 50.7 1.0 O2 A:LCL201 3.6 49.3 1.0 ND2 A:ASN20 3.6 26.8 1.0 CG A:ASN20 3.7 29.7 1.0 C3 A:LCL201 3.7 51.8 1.0 O4 A:LCL201 4.0 49.1 1.0 CG B:ASN20 4.1 33.5 1.0 CG2 B:ILE16 4.5 32.5 1.0 CE1 A:HIS42 4.6 65.9 1.0 ND2 B:ASN20 4.7 34.4 1.0 CB A:ASN20 4.8 28.5 1.0

Chlorine binding site 2 out of 4 in the Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl201 b:46.5 occ:1.00 CL2 A:LCL201 0.0 46.5 1.0 C1 A:LCL201 1.8 48.9 1.0 C2 A:LCL201 2.8 49.2 1.0 C4 A:LCL201 2.9 51.9 1.0 CL1 A:LCL201 3.0 47.6 1.0 C8 A:LCL201 3.2 50.2 1.0 CE1 A:HIS42 3.2 65.9 1.0 C7 A:LCL201 3.2 50.5 1.0 C9 A:LCL201 3.3 49.2 1.0 N2 A:LCL201 3.3 50.7 1.0 ND1 A:HIS42 3.3 64.6 1.0 C6 A:LCL201 3.4 51.3 1.0 C10 A:LCL201 3.5 49.6 1.0 C3 A:LCL201 3.5 51.8 1.0 C11 A:LCL201 3.5 50.2 1.0 NE2 A:HIS42 3.5 65.7 1.0 O2 A:LCL201 3.7 49.3 1.0 CG A:HIS42 3.8 64.7 1.0 CD2 A:HIS42 3.9 65.3 1.0 C5 A:LCL201 4.0 52.1 1.0 N9 A:LCL201 4.2 48.4 1.0 O9A A:LCL201 4.2 46.7 1.0 O4 A:LCL201 4.2 49.1 1.0 O9B A:LCL201 4.5 47.0 1.0 OE1 A:GLN61 4.6 82.2 1.0 CB A:HIS42 4.7 62.2 1.0 O5 A:LCL201 4.9 52.9 1.0

Chlorine binding site 3 out of 4 in the Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl200 b:56.5 occ:1.00 CL1 B:LCL200 0.0 56.5 1.0 C1 B:LCL200 1.8 57.7 1.0 C2 B:LCL200 2.7 58.0 1.0 N2 B:LCL200 2.8 57.9 1.0 CL2 B:LCL200 2.9 55.8 1.0 C11 B:LCL200 3.8 53.0 1.0 O2 B:LCL200 3.9 58.2 1.0 C3 B:LCL200 4.2 56.5 1.0 C10 B:LCL200 4.4 52.2 1.0 C4 B:LCL200 4.7 55.9 1.0 O4 B:LCL200 4.7 54.8 1.0 C6 B:LCL200 4.9 54.1 1.0

Chlorine binding site 4 out of 4 in the Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Staphylococcus Epidermidis Tcar in Complex with Chloramphenicol within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl200 b:55.8 occ:1.00 CL2 B:LCL200 0.0 55.8 1.0 C1 B:LCL200 1.8 57.7 1.0 C2 B:LCL200 2.8 58.0 1.0 CL1 B:LCL200 2.9 56.5 1.0 NE B:ARG70 2.9 63.3 1.0 O2 B:LCL200 3.3 58.2 1.0 CG B:ARG70 3.6 54.8 1.0 N2 B:LCL200 3.6 57.9 1.0 NH1 B:ARG70 3.6 67.0 1.0 CZ B:ARG70 3.7 66.1 1.0 CD B:ARG70 3.8 59.3 1.0 CB B:ARG70 3.9 51.0 1.0 C11 B:LCL200 4.1 53.0 1.0 C10 B:LCL200 4.3 52.2 1.0 O B:ALA66 4.8 45.5 1.0 C6 B:LCL200 4.9 54.1 1.0 C3 B:LCL200 4.9 56.5 1.0

Y.M.Chang, C.K.M.Chen, T.P.Ko, M.W.Chang-Chien, A.H.J.Wang. Structural Analysis of the Antibiotic Recognition Mechanism of Marr Family Proteins Acta Crystallogr.,Sect.D 2013.
ISSN: ISSN 0907-4449