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Chlorine in PDB 4emx: Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature

Protein crystallography data

The structure of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature, PDB code: 4emx was solved by H.Botti, L.Bonilla, F.Trajtenberg, R.Radi, A.Buschiazzo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.50 / 2.30
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 58.880, 59.230, 95.610, 75.17, 87.83, 74.20
R / Rfree (%) 18.7 / 23.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature (pdb code 4emx). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature, PDB code: 4emx:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4emx

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Chlorine binding site 1 out of 6 in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:98.7
occ:1.00
NZ A:LYS432 3.1 88.6 1.0
NZ A:LYS190 3.2 0.5 1.0
CE A:LYS432 4.0 84.2 1.0
NH1 A:ARG428 4.3 72.6 1.0
CE A:LYS190 4.6 91.3 1.0
CD A:LYS519 4.6 0.1 1.0

Chlorine binding site 2 out of 6 in 4emx

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Chlorine binding site 2 out of 6 in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:67.6
occ:1.00
NE2 A:HIS242 2.8 42.0 1.0
O A:HOH811 2.9 65.8 1.0
O A:HOH718 2.9 50.4 1.0
O A:HOH822 2.9 57.6 1.0
CE1 A:HIS242 3.5 38.4 1.0
CD1 A:LEU238 3.7 47.2 1.0
CE2 A:TYR150 4.0 45.3 1.0
OH A:TYR150 4.0 44.8 1.0
CD2 A:HIS242 4.0 44.7 1.0
CE A:LYS199 4.1 51.4 1.0
CB A:ALA291 4.3 47.7 1.0
CZ A:TYR150 4.4 45.7 1.0
O A:HOH823 4.7 65.6 1.0
CG A:LEU238 4.7 54.3 1.0
O A:HOH717 4.7 63.8 1.0
CD2 A:LEU238 4.7 44.6 1.0
O A:HOH800 4.8 54.1 1.0
O A:HOH773 4.8 51.6 1.0
NZ A:LYS199 4.8 47.2 1.0
O A:HOH782 4.8 53.0 1.0
ND1 A:HIS242 4.8 38.9 1.0
CD A:LYS199 4.9 49.0 1.0
CD2 A:TYR150 5.0 44.9 1.0

Chlorine binding site 3 out of 6 in 4emx

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Chlorine binding site 3 out of 6 in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:92.8
occ:1.00
OH A:TYR411 3.1 68.4 1.0
OG A:SER489 3.5 69.7 1.0
CE1 A:TYR411 3.7 64.8 1.0
CZ A:TYR411 3.8 64.9 1.0
NH1 A:ARG410 4.0 63.3 1.0
CB A:SER489 4.3 61.6 1.0
CA A:SER489 4.4 60.1 1.0
CD A:ARG410 4.5 66.5 1.0
CD1 A:LEU387 4.5 70.3 1.0
NZ A:LYS414 4.6 61.2 1.0
CE A:LYS414 4.8 63.0 1.0
CD1 A:TYR411 5.0 59.3 1.0

Chlorine binding site 4 out of 6 in 4emx

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Chlorine binding site 4 out of 6 in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:80.5
occ:1.00
OH B:TYR411 2.8 70.0 1.0
OG B:SER489 3.1 69.7 1.0
CE1 B:TYR411 3.6 69.6 1.0
CZ B:TYR411 3.6 68.3 1.0
O B:HOH712 3.8 69.0 1.0
CB B:SER489 3.9 68.2 1.0
CA B:SER489 3.9 64.5 1.0
O B:HOH800 4.0 69.9 1.0
NH1 B:ARG410 4.3 64.0 1.0
CD1 B:LEU387 4.3 80.8 1.0
NZ B:LYS414 4.5 70.3 1.0
N B:SER489 4.5 60.4 1.0
CE B:LYS414 4.6 67.8 1.0
CD B:ARG410 4.7 62.8 1.0
CD1 B:TYR411 4.9 63.1 1.0
CE2 B:TYR411 5.0 57.9 1.0

Chlorine binding site 5 out of 6 in 4emx

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Chlorine binding site 5 out of 6 in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:81.9
occ:1.00
NZ B:LYS199 3.1 43.3 1.0
CH2 B:TRP214 3.5 58.0 1.0
CE B:LYS195 3.7 89.7 1.0
CZ2 B:TRP214 3.8 53.5 1.0
NZ B:LYS195 3.9 94.2 1.0
CE B:LYS199 4.0 50.5 1.0
O B:HOH747 4.2 52.0 1.0
CG B:LYS195 4.6 71.2 1.0
O B:ALA291 4.7 60.6 1.0
CZ3 B:TRP214 4.8 62.7 1.0
CD B:LYS195 4.8 83.6 1.0

Chlorine binding site 6 out of 6 in 4emx

Go back to Chlorine Binding Sites List in 4emx
Chlorine binding site 6 out of 6 in the Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure Analysis of Human Serum Albumin in Complex with Chloride Anions at Cryogenic Temperature within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl603

b:78.4
occ:1.00
OH B:TYR150 2.8 50.7 1.0
NE B:ARG257 3.5 69.1 1.0
CE2 B:TYR150 3.6 49.9 1.0
CZ B:TYR150 3.7 54.2 1.0
CG B:ARG257 3.9 56.0 1.0
CB B:ALA291 3.9 53.6 1.0
O B:HOH716 4.1 52.1 1.0
CD B:ARG257 4.1 61.7 1.0
O B:SER287 4.1 60.0 1.0
CZ B:ARG257 4.3 63.3 1.0
NH2 B:ARG257 4.4 57.2 1.0
CD1 B:LEU238 4.5 52.3 1.0
O B:HOH747 4.6 52.0 1.0
OG B:SER287 4.8 68.4 1.0
NE2 B:HIS242 4.8 45.7 1.0
C B:SER287 4.9 56.0 1.0
CD2 B:TYR150 5.0 59.3 1.0

Reference:

H.Botti, L.Bonilla, F.Trajtenberg, R.Radi, A.Buschiazzo. New Insights on B Factors in Crystal Structure Analysis and Crystallographic Model Refinement To Be Published.
Page generated: Sun Jul 21 13:07:44 2024

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