Atomistry » Chlorine » PDB 4eml-4eu3 » 4eoy
Atomistry »
  Chlorine »
    PDB 4eml-4eu3 »
      4eoy »

Chlorine in PDB 4eoy: Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide

Protein crystallography data

The structure of Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide, PDB code: 4eoy was solved by A.U.P.Hain, J.Bosch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.22
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 33.300, 111.080, 57.090, 90.00, 92.58, 90.00
R / Rfree (%) 20.5 / 28

Other elements in 4eoy:

The structure of Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide (pdb code 4eoy). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide, PDB code: 4eoy:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4eoy

Go back to Chlorine Binding Sites List in 4eoy
Chlorine binding site 1 out of 3 in the Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:0.1
occ:1.00
CD1 A:ILE43 2.9 36.3 1.0
CG1 A:ILE43 3.3 36.2 1.0
CB A:ILE43 3.5 33.6 1.0
N A:ILE43 4.1 33.4 1.0
CA A:ILE43 4.4 35.1 1.0
CG2 A:ILE43 4.6 31.6 1.0

Chlorine binding site 2 out of 3 in 4eoy

Go back to Chlorine Binding Sites List in 4eoy
Chlorine binding site 2 out of 3 in the Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:93.2
occ:1.00
CG1 C:VAL15 4.5 50.2 1.0
CE2 C:PHE11 4.7 43.1 1.0

Chlorine binding site 3 out of 3 in 4eoy

Go back to Chlorine Binding Sites List in 4eoy
Chlorine binding site 3 out of 3 in the Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Plasmodium Falciparum ATG8 in Complex with Plasmodium Falciparum ATG3 Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cl301

b:77.6
occ:1.00
O F:HOH410 3.2 37.4 1.0
N F:ASP104 4.5 74.0 1.0
CB F:ASP104 4.6 50.1 1.0
O F:HOH409 4.8 37.0 1.0
O C:HOH402 4.9 42.2 1.0

Reference:

A.U.Hain, R.R.Weltzer, H.Hammond, B.Jayabalasingham, R.R.Dinglasan, D.R.Graham, D.R.Colquhoun, I.Coppens, J.Bosch. Structural Characterization and Inhibition of the Plasmodium ATG8-ATG3 Interaction. J.Struct.Biol. V. 180 551 2012.
ISSN: ISSN 1047-8477
PubMed: 22982544
DOI: 10.1016/J.JSB.2012.09.001
Page generated: Sat Dec 12 10:35:16 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy