Chlorine in PDB 4eps: Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution
Protein crystallography data
The structure of Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution, PDB code: 4eps
was solved by
Joint Center For Structural Genomics (Jcsg),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.06 /
1.85
|
Space group
|
P 41 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
77.956,
77.956,
250.498,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
16.4 /
18
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution
(pdb code 4eps). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution, PDB code: 4eps:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 4eps
Go back to
Chlorine Binding Sites List in 4eps
Chlorine binding site 1 out
of 4 in the Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl601
b:78.8
occ:1.00
|
O
|
A:HOH1334
|
3.3
|
38.8
|
0.5
|
O2
|
A:GOL608
|
3.3
|
68.3
|
1.0
|
O2
|
A:GOL609
|
3.4
|
51.0
|
1.0
|
CG2
|
A:THR63
|
3.8
|
39.0
|
0.5
|
N
|
A:THR63
|
3.8
|
32.1
|
0.5
|
O
|
A:THR63
|
3.9
|
27.1
|
0.5
|
N
|
A:THR63
|
3.9
|
34.8
|
0.5
|
O
|
A:HOH1154
|
4.0
|
67.2
|
1.0
|
CA
|
A:THR62
|
4.1
|
33.7
|
1.0
|
C2
|
A:GOL608
|
4.2
|
67.2
|
1.0
|
O
|
A:HOH913
|
4.3
|
45.2
|
1.0
|
CG2
|
A:THR63
|
4.3
|
49.4
|
0.5
|
O
|
A:HOH1110
|
4.4
|
57.8
|
1.0
|
O
|
A:VAL61
|
4.5
|
33.8
|
1.0
|
C
|
A:THR62
|
4.5
|
35.9
|
1.0
|
CG2
|
A:THR62
|
4.7
|
45.1
|
1.0
|
CA
|
A:THR63
|
4.7
|
30.4
|
0.5
|
C
|
A:THR63
|
4.7
|
28.7
|
0.5
|
CB
|
A:THR62
|
4.7
|
45.4
|
1.0
|
C2
|
A:GOL609
|
4.8
|
47.4
|
1.0
|
OG1
|
A:THR62
|
4.8
|
46.5
|
1.0
|
CB
|
A:THR63
|
4.9
|
41.3
|
0.5
|
O3
|
A:GOL608
|
4.9
|
66.7
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 4eps
Go back to
Chlorine Binding Sites List in 4eps
Chlorine binding site 2 out
of 4 in the Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl602
b:52.5
occ:1.00
|
O
|
A:HOH1177
|
2.9
|
63.4
|
1.0
|
N
|
A:ALA516
|
3.0
|
21.4
|
1.0
|
O
|
A:HOH1351
|
3.3
|
77.1
|
1.0
|
O
|
A:HOH1254
|
3.8
|
58.4
|
1.0
|
CA
|
A:SER515
|
3.8
|
21.4
|
1.0
|
C
|
A:SER515
|
3.9
|
24.0
|
1.0
|
CB
|
A:ALA516
|
3.9
|
23.6
|
1.0
|
O
|
A:ALA516
|
3.9
|
27.2
|
1.0
|
O
|
A:HOH1069
|
3.9
|
52.5
|
1.0
|
CA
|
A:ALA516
|
3.9
|
22.6
|
1.0
|
O
|
A:HOH1237
|
4.0
|
69.4
|
1.0
|
OG
|
A:SER515
|
4.1
|
32.2
|
1.0
|
CD2
|
A:LEU409
|
4.3
|
34.4
|
1.0
|
O
|
A:HOH1134
|
4.3
|
57.1
|
1.0
|
C
|
A:ALA516
|
4.4
|
26.3
|
1.0
|
CB
|
A:SER515
|
4.5
|
26.2
|
1.0
|
O
|
A:GLY514
|
4.5
|
23.7
|
1.0
|
CG2
|
A:VAL462
|
4.7
|
24.6
|
1.0
|
O
|
A:HOH1065
|
4.8
|
53.2
|
1.0
|
N
|
A:SER515
|
4.9
|
20.7
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 4eps
Go back to
Chlorine Binding Sites List in 4eps
Chlorine binding site 3 out
of 4 in the Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl603
b:49.4
occ:1.00
|
O
|
A:HOH1233
|
2.8
|
59.3
|
1.0
|
O
|
A:HOH1155
|
2.9
|
56.8
|
1.0
|
N
|
A:TYR285
|
3.1
|
23.2
|
1.0
|
CB
|
A:TYR285
|
3.7
|
25.3
|
1.0
|
CA
|
A:GLY284
|
3.9
|
22.8
|
1.0
|
CE
|
A:LYS189
|
3.9
|
41.9
|
1.0
|
CA
|
A:TYR285
|
3.9
|
23.1
|
1.0
|
C
|
A:GLY284
|
3.9
|
26.1
|
1.0
|
CG
|
A:LYS189
|
3.9
|
27.5
|
1.0
|
NH1
|
A:ARG278
|
4.1
|
39.5
|
0.5
|
O
|
A:GLY283
|
4.3
|
29.0
|
1.0
|
O
|
A:TYR285
|
4.3
|
23.6
|
1.0
|
CD
|
A:LYS189
|
4.5
|
33.5
|
1.0
|
NH2
|
A:ARG278
|
4.5
|
49.6
|
0.5
|
C
|
A:TYR285
|
4.6
|
26.6
|
1.0
|
CG1
|
A:VAL280
|
4.7
|
24.2
|
1.0
|
CZ
|
A:ARG278
|
4.7
|
60.1
|
0.5
|
N
|
A:GLY284
|
4.9
|
23.8
|
1.0
|
C
|
A:GLY283
|
5.0
|
28.6
|
1.0
|
CG
|
A:TYR285
|
5.0
|
27.6
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 4eps
Go back to
Chlorine Binding Sites List in 4eps
Chlorine binding site 4 out
of 4 in the Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of A Fimbrial Protein (BACOVA_04982) From Bacteroides Ovatus Atcc 8483 at 1.85 A Resolution within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl604
b:74.2
occ:1.00
|
O
|
A:HOH1355
|
3.2
|
62.8
|
1.0
|
O
|
A:HOH1201
|
3.2
|
65.3
|
1.0
|
N
|
A:LYS511
|
3.3
|
28.4
|
1.0
|
CB
|
A:SER510
|
3.7
|
26.4
|
1.0
|
O
|
A:HOH1122
|
3.8
|
59.8
|
1.0
|
CB
|
A:LYS511
|
3.9
|
33.0
|
1.0
|
CG
|
A:LYS511
|
3.9
|
45.4
|
1.0
|
CA
|
A:SER510
|
4.0
|
26.2
|
1.0
|
C
|
A:SER510
|
4.1
|
31.2
|
1.0
|
CA
|
A:LYS511
|
4.2
|
28.6
|
1.0
|
CD
|
A:LYS511
|
4.4
|
61.4
|
1.0
|
O
|
A:HOH1268
|
4.4
|
66.0
|
1.0
|
OG
|
A:SER510
|
4.6
|
29.8
|
1.0
|
|
Reference:
Joint Center For Structural Genomics (Jcsg),
Joint Center For Structural Genomics (Jcsg).
N/A N/A.
Page generated: Sun Jul 21 13:11:11 2024
|