Atomistry » Chlorine » PDB 4emw-4eu4 » 4eqb
Atomistry »
  Chlorine »
    PDB 4emw-4eu4 »
      4eqb »

Chlorine in PDB 4eqb: 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes

Protein crystallography data

The structure of 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes, PDB code: 4eqb was solved by G.Minasov, Z.Wawrzak, P.J.Stogios, M.Kudritska, V.Yim, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.10 / 1.50
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 45.635, 54.347, 76.704, 75.83, 80.87, 77.56
R / Rfree (%) 15.5 / 18.6

Other elements in 4eqb:

The structure of 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes also contains other interesting chemical elements:

Calcium (Ca) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes (pdb code 4eqb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes, PDB code: 4eqb:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4eqb

Go back to Chlorine Binding Sites List in 4eqb
Chlorine binding site 1 out of 2 in the 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:20.3
occ:0.75
O A:HOH619 3.2 23.0 1.0
N A:GLU288 3.3 11.0 1.0
O A:HOH570 3.3 17.4 1.0
CD A:PRO287 3.5 11.0 1.0
N A:PRO287 3.6 9.9 1.0
CG A:GLU288 3.6 13.2 1.0
CB A:GLU288 3.8 12.5 1.0
CB A:LYS286 3.9 12.9 1.0
C A:LYS286 4.0 11.6 1.0
CD A:GLU288 4.0 13.7 1.0
CA A:GLU288 4.1 10.9 1.0
CA A:PRO287 4.2 11.2 1.0
C A:PRO287 4.2 10.7 1.0
CA A:LYS286 4.2 11.7 1.0
CB A:PRO287 4.2 11.6 1.0
OE2 A:GLU288 4.3 15.2 1.0
CG A:PRO287 4.4 12.5 1.0
O A:HOH648 4.6 25.1 1.0
OE1 A:GLU288 4.6 12.3 1.0
CG A:LYS286 4.7 14.8 1.0
O A:LYS286 4.7 10.8 1.0
CD A:LYS286 4.7 23.3 1.0
O A:HOH543 4.8 17.7 1.0

Chlorine binding site 2 out of 2 in 4eqb

Go back to Chlorine Binding Sites List in 4eqb
Chlorine binding site 2 out of 2 in the 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein Potd From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl405

b:20.0
occ:0.75
O A:HOH649 3.2 24.4 1.0
O A:HOH682 3.3 25.0 1.0
O B:HOH550 3.3 18.6 1.0
N B:GLU288 3.3 12.4 1.0
O A:HOH754 3.4 29.2 1.0
CD B:PRO287 3.5 12.6 1.0
N B:PRO287 3.5 12.1 1.0
CG B:GLU288 3.6 14.1 1.0
CB B:LYS286 3.8 15.0 1.0
CB B:GLU288 3.9 13.8 1.0
C B:LYS286 3.9 12.5 1.0
CD B:GLU288 4.1 14.8 1.0
CA B:LYS286 4.2 13.5 1.0
CA B:GLU288 4.2 12.6 1.0
CA B:PRO287 4.2 13.3 1.0
C B:PRO287 4.2 11.6 1.0
CG A:PRO48 4.2 14.8 1.0
CB B:PRO287 4.3 15.2 1.0
CG B:PRO287 4.3 14.7 1.0
O A:HOH521 4.4 16.3 1.0
OE2 B:GLU288 4.4 16.6 1.0
O A:HOH721 4.6 27.7 1.0
CG B:LYS286 4.6 15.7 1.0
CD B:LYS286 4.7 23.4 1.0
O B:LYS286 4.7 12.8 1.0
OE1 B:GLU288 4.7 13.6 1.0
OD1 A:ASP44 4.8 29.9 1.0
O B:HOH519 4.8 17.2 1.0

Reference:

G.Minasov, Z.Wawrzak, P.J.Stogios, M.Kudritska, V.Yim, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.5 Angstrom Crystal Structure of Spermidine/Putrescine Abc Transporter Substrate-Binding Protein From Streptococcus Pneumoniae Strain Canada MDR_19A in Complex with Calcium and Hepes. To Be Published.
Page generated: Sun Jul 21 13:11:27 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy