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Chlorine in PDB 4et8: Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data

Enzymatic activity of Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data

All present enzymatic activity of Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data:
3.2.1.17;

Protein crystallography data

The structure of Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data, PDB code: 4et8 was solved by S.Boutet, L.Lomb, G.Williams, T.Barends, A.Aquila, R.B.Doak, U.Weierstall, D.Deponte, J.Steinbrener, R.Shoeman, M.Messerschmidt, A.Barty, T.White, S.Kassemeyer, R.Kirian, M.Seibert, P.Montanez, C.Kenney, R.Herbst, P.Hart, J.Pines, G.Haller, S.Gruner, H.Philllip, M.Tate, M.Hromalik, L.Koerner, N.Van Bakel, J.Morse, W.Ghonsalves, D.Arnlund, M.Bogan, C.Calemann, R.Fromme, C.Hampton, M.Hunter, L.Johansson, G.Katona, C.Kupitz, M.Liang, A.Martin, K.Nass, L.Redecke, F.Stellato, N.Timneanu, D.Wang, N.Zatsepin, D.Schafer, K.Defever, R.Neutze, P.Fromme, J.Spence, H.Chapman, I.Schlichting, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.30 / 1.90
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.000, 79.000, 38.000, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 22.9

Other elements in 4et8:

The structure of Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data (pdb code 4et8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data, PDB code: 4et8:

Chlorine binding site 1 out of 1 in 4et8

Go back to Chlorine Binding Sites List in 4et8
Chlorine binding site 1 out of 1 in the Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Hen Egg-White Lysozyme Solved From 40 Fs Free-Electron Laser Pulse Data within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:28.7
occ:1.00
OH A:TYR23 2.9 20.9 1.0
CZ A:TYR23 3.6 19.9 1.0
CE2 A:TYR23 3.7 20.2 1.0
CA A:GLY104 4.0 23.3 1.0
O A:ARG21 4.6 22.5 1.0
N A:GLY104 4.7 21.8 1.0
O A:HOH312 4.8 30.9 1.0
CE1 A:TYR23 4.8 20.6 1.0
CD2 A:TYR23 4.9 22.0 1.0

Reference:

S.Boutet, L.Lomb, G.J.Williams, T.R.Barends, A.Aquila, R.B.Doak, U.Weierstall, D.P.Deponte, J.Steinbrener, R.L.Shoeman, M.Messerschmidt, A.Barty, T.A.White, S.Kassemeyer, R.A.Kirian, M.M.Seibert, P.A.Montanez, C.Kenney, R.Herbst, P.Hart, J.Pines, G.Haller, S.M.Gruner, H.T.Philipp, M.W.Tate, M.Hromalik, L.J.Koerner, N.Van Bakel, J.Morse, W.Ghonsalves, D.Arnlund, M.J.Bogan, C.Caleman, R.Fromme, C.Y.Hampton, M.S.Hunter, L.C.Johansson, G.Katona, C.Kupitz, M.Liang, A.V.Martin, K.Nass, L.Redecke, F.Stellato, N.Timneanu, D.Wang, N.A.Zatsepin, D.Schafer, J.Defever, R.Neutze, P.Fromme, J.C.Spence, H.N.Chapman, I.Schlichting. High-Resolution Protein Structure Determination By Serial Femtosecond Crystallography. Science V. 337 362 2012.
ISSN: ISSN 0036-8075
PubMed: 22653729
DOI: 10.1126/SCIENCE.1217737
Page generated: Sat Dec 12 10:35:29 2020

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