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Chlorine in PDB 4f4d: F337R Variant of Human Ferrochelatase

Enzymatic activity of F337R Variant of Human Ferrochelatase

All present enzymatic activity of F337R Variant of Human Ferrochelatase:
4.99.1.1;

Protein crystallography data

The structure of F337R Variant of Human Ferrochelatase, PDB code: 4f4d was solved by W.N.Lanzilotta, A.E.Medlock, T.E.Dailey, H.A.Dailey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 88.210, 93.511, 111.929, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 20.7

Other elements in 4f4d:

The structure of F337R Variant of Human Ferrochelatase also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the F337R Variant of Human Ferrochelatase (pdb code 4f4d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the F337R Variant of Human Ferrochelatase, PDB code: 4f4d:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4f4d

Go back to Chlorine Binding Sites List in 4f4d
Chlorine binding site 1 out of 2 in the F337R Variant of Human Ferrochelatase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of F337R Variant of Human Ferrochelatase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:22.8
occ:1.00
OG A:SER130 3.0 21.2 1.0
OH A:TYR123 3.2 20.5 1.0
N A:ILE342 3.2 14.9 1.0
CB A:SER130 3.4 19.5 1.0
O A:HOH833 3.4 33.2 1.0
CD1 A:ILE132 3.5 21.6 1.0
CE2 A:TYR123 3.7 19.2 1.0
CB A:ILE342 3.8 18.0 1.0
CG2 A:ILE342 3.9 22.0 1.0
CZ A:TYR123 3.9 18.7 1.0
CD2 A:HIS341 3.9 25.0 1.0
CG A:HIS341 3.9 19.9 1.0
CA A:HIS341 4.0 16.0 1.0
NE2 A:HIS341 4.0 24.0 1.0
ND1 A:HIS341 4.0 22.4 1.0
C A:HIS341 4.0 12.8 1.0
CE1 A:HIS341 4.0 26.9 1.0
CA A:SER130 4.1 18.3 1.0
CA A:ILE342 4.1 16.8 1.0
CG1 A:ILE132 4.1 18.0 1.0
CA A:GLY78 4.4 17.6 1.0
CB A:HIS341 4.5 16.4 1.0
CD A:PRO131 4.7 17.8 1.0
CD2 A:TYR123 5.0 16.2 1.0

Chlorine binding site 2 out of 2 in 4f4d

Go back to Chlorine Binding Sites List in 4f4d
Chlorine binding site 2 out of 2 in the F337R Variant of Human Ferrochelatase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of F337R Variant of Human Ferrochelatase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:24.4
occ:1.00
OG B:SER130 3.1 19.5 1.0
OH B:TYR123 3.1 21.8 1.0
N B:ILE342 3.2 14.1 1.0
O B:HOH780 3.4 27.5 1.0
CB B:SER130 3.4 17.1 1.0
CD1 B:ILE132 3.4 21.2 1.0
CE2 B:TYR123 3.7 18.9 1.0
CB B:ILE342 3.8 18.8 1.0
CZ B:TYR123 3.9 22.6 1.0
CG2 B:ILE342 3.9 18.8 1.0
CA B:HIS341 4.0 14.8 1.0
ND1 B:HIS341 4.0 24.9 1.0
C B:HIS341 4.0 13.3 1.0
CG B:HIS341 4.1 19.2 1.0
CE1 B:HIS341 4.1 25.1 1.0
CD2 B:HIS341 4.1 20.9 1.0
NE2 B:HIS341 4.1 21.0 1.0
CA B:ILE342 4.1 15.9 1.0
CA B:SER130 4.2 18.6 1.0
CG1 B:ILE132 4.2 18.1 1.0
CA B:GLY78 4.3 19.0 1.0
CB B:HIS341 4.6 15.6 1.0
CD B:PRO131 4.8 19.4 1.0
N B:GLY78 5.0 20.9 1.0

Reference:

W.N.Lanzilotta, A.E.Medlock, T.E.Dailey, H.A.Dailey. F337R Variant of Human Ferrochelatase To Be Published.
Page generated: Sat Dec 12 10:36:26 2020

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