Chlorine in PDB 4fge: Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa
Protein crystallography data
The structure of Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa, PDB code: 4fge
was solved by
J.Benz,
C.Sendlmeier,
T.R.M.Barends,
A.Meinhart,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
47.62 /
1.70
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
48.240,
100.380,
62.180,
90.00,
99.35,
90.00
|
R / Rfree (%)
|
17.5 /
20.3
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa
(pdb code 4fge). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa, PDB code: 4fge:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 4fge
Go back to
Chlorine Binding Sites List in 4fge
Chlorine binding site 1 out
of 4 in the Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:32.0
occ:1.00
|
O
|
A:HOH305
|
2.4
|
28.0
|
1.0
|
O
|
A:HOH306
|
3.2
|
19.8
|
1.0
|
O
|
A:HOH330
|
3.2
|
32.6
|
1.0
|
CD1
|
A:TYR89
|
3.5
|
28.7
|
1.0
|
N
|
C:ALA22
|
3.6
|
28.6
|
1.0
|
CB
|
A:ASN49
|
3.7
|
21.1
|
1.0
|
CB
|
C:ALA22
|
3.9
|
32.6
|
1.0
|
N
|
A:ALA50
|
4.0
|
18.9
|
1.0
|
O
|
A:HOH309
|
4.0
|
27.2
|
1.0
|
CB
|
A:TYR89
|
4.0
|
27.9
|
1.0
|
CD1
|
C:LEU21
|
4.0
|
30.5
|
1.0
|
CG
|
A:TYR89
|
4.1
|
29.2
|
1.0
|
CA
|
C:LEU21
|
4.3
|
24.7
|
1.0
|
CE1
|
A:TYR89
|
4.4
|
30.1
|
1.0
|
CA
|
C:ALA22
|
4.4
|
30.6
|
1.0
|
CG
|
A:ASN49
|
4.4
|
23.2
|
1.0
|
C
|
C:LEU21
|
4.5
|
26.5
|
1.0
|
CB
|
A:ALA50
|
4.5
|
19.4
|
1.0
|
O
|
C:TYR20
|
4.5
|
21.7
|
1.0
|
CA
|
A:ASN49
|
4.5
|
19.8
|
1.0
|
ND2
|
A:ASN49
|
4.6
|
24.5
|
1.0
|
CG
|
C:LEU21
|
4.7
|
29.8
|
1.0
|
C
|
A:ASN49
|
4.7
|
19.1
|
1.0
|
O
|
A:GLY90
|
4.8
|
22.6
|
1.0
|
CA
|
A:TYR89
|
4.8
|
28.8
|
1.0
|
CA
|
A:ALA50
|
4.9
|
19.0
|
1.0
|
N
|
A:GLY90
|
4.9
|
25.4
|
1.0
|
O
|
A:HOH350
|
4.9
|
27.5
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 4fge
Go back to
Chlorine Binding Sites List in 4fge
Chlorine binding site 2 out
of 4 in the Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl202
b:59.0
occ:1.00
|
CB
|
A:SER144
|
3.6
|
40.3
|
1.0
|
CE
|
A:LYS73
|
3.7
|
43.4
|
1.0
|
CD
|
A:LYS73
|
3.7
|
39.3
|
1.0
|
CA
|
A:SER144
|
3.7
|
37.7
|
1.0
|
CG2
|
A:VAL142
|
4.0
|
28.4
|
1.0
|
CD1
|
A:PHE78
|
4.0
|
31.9
|
1.0
|
CG
|
A:PHE78
|
4.1
|
30.6
|
1.0
|
CE1
|
A:PHE78
|
4.1
|
33.1
|
1.0
|
CG1
|
A:VAL142
|
4.1
|
30.8
|
1.0
|
CD2
|
A:PHE78
|
4.1
|
32.1
|
1.0
|
CZ
|
A:PHE78
|
4.2
|
36.7
|
1.0
|
CE2
|
A:PHE78
|
4.2
|
34.6
|
1.0
|
CG
|
A:LYS73
|
4.6
|
34.8
|
1.0
|
O
|
A:SER144
|
4.6
|
41.9
|
1.0
|
N
|
A:SER144
|
4.7
|
34.4
|
1.0
|
C
|
A:SER144
|
4.7
|
40.0
|
1.0
|
CB
|
A:VAL142
|
4.7
|
29.0
|
1.0
|
CB
|
A:PHE78
|
4.8
|
28.4
|
1.0
|
OG
|
A:SER144
|
4.9
|
42.6
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 4fge
Go back to
Chlorine Binding Sites List in 4fge
Chlorine binding site 3 out
of 4 in the Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl201
b:18.5
occ:0.50
|
CL
|
C:CL201
|
0.0
|
18.5
|
0.5
|
CL
|
C:CL201
|
2.0
|
34.8
|
0.5
|
O
|
C:HOH303
|
3.1
|
18.6
|
1.0
|
O
|
C:HOH353
|
3.6
|
34.4
|
1.0
|
CD1
|
C:TYR89
|
3.6
|
29.8
|
1.0
|
N
|
A:ALA22
|
3.6
|
27.7
|
1.0
|
CB
|
C:ASN49
|
3.6
|
19.5
|
1.0
|
CB
|
A:ALA22
|
3.8
|
32.1
|
1.0
|
N
|
C:ALA50
|
3.8
|
16.3
|
1.0
|
CD1
|
A:LEU21
|
4.0
|
31.1
|
1.0
|
CB
|
C:TYR89
|
4.0
|
27.7
|
1.0
|
O
|
C:HOH386
|
4.1
|
27.1
|
1.0
|
CG
|
C:TYR89
|
4.1
|
29.9
|
1.0
|
CB
|
C:ALA50
|
4.3
|
16.6
|
1.0
|
CA
|
A:ALA22
|
4.3
|
30.1
|
1.0
|
CA
|
A:LEU21
|
4.4
|
23.7
|
1.0
|
CE1
|
C:TYR89
|
4.4
|
30.6
|
1.0
|
CG
|
C:ASN49
|
4.4
|
21.5
|
1.0
|
CA
|
C:ASN49
|
4.4
|
18.1
|
1.0
|
C
|
A:LEU21
|
4.5
|
25.4
|
1.0
|
CG
|
A:LEU21
|
4.5
|
28.6
|
1.0
|
O
|
A:TYR20
|
4.6
|
20.4
|
1.0
|
C
|
C:ASN49
|
4.6
|
17.1
|
1.0
|
ND2
|
C:ASN49
|
4.7
|
24.0
|
1.0
|
CA
|
C:ALA50
|
4.7
|
15.9
|
1.0
|
O
|
C:GLY90
|
4.8
|
20.3
|
1.0
|
CA
|
C:TYR89
|
4.8
|
28.1
|
1.0
|
N
|
C:GLY90
|
4.9
|
24.0
|
1.0
|
O
|
C:HOH319
|
4.9
|
28.3
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 4fge
Go back to
Chlorine Binding Sites List in 4fge
Chlorine binding site 4 out
of 4 in the Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Structure of the Effector Protein TSE1 From Pseudomonas Aeruginosa within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Cl201
b:34.8
occ:0.50
|
CL
|
C:CL201
|
0.0
|
34.8
|
0.5
|
CL
|
C:CL201
|
2.0
|
18.5
|
0.5
|
N
|
C:ALA50
|
3.1
|
16.3
|
1.0
|
OG
|
C:SER31
|
3.2
|
18.2
|
1.0
|
CD1
|
A:LEU21
|
3.4
|
31.1
|
1.0
|
O
|
C:HOH386
|
3.5
|
27.1
|
1.0
|
CB
|
C:ALA50
|
3.6
|
16.6
|
1.0
|
CB
|
C:SER31
|
3.8
|
16.1
|
1.0
|
CB
|
C:ASN49
|
3.8
|
19.5
|
1.0
|
CA
|
C:ASN49
|
3.8
|
18.1
|
1.0
|
CA
|
C:ALA50
|
3.9
|
15.9
|
1.0
|
C
|
C:ASN49
|
3.9
|
17.1
|
1.0
|
SG
|
C:CYS30
|
3.9
|
19.2
|
1.0
|
O
|
C:HOH353
|
4.0
|
34.4
|
1.0
|
OD1
|
C:ASN29
|
4.2
|
19.1
|
1.0
|
O
|
C:HOH303
|
4.2
|
18.6
|
1.0
|
N
|
C:SER31
|
4.3
|
15.0
|
1.0
|
CG
|
A:LEU21
|
4.4
|
28.6
|
1.0
|
CA
|
C:SER31
|
4.7
|
15.0
|
1.0
|
N
|
A:ALA22
|
4.9
|
27.7
|
1.0
|
O
|
C:HOH306
|
4.9
|
21.8
|
1.0
|
O
|
C:GLY90
|
5.0
|
20.3
|
1.0
|
CG
|
C:ASN49
|
5.0
|
21.5
|
1.0
|
|
Reference:
J.Benz,
C.Sendlmeier,
T.R.Barends,
A.Meinhart.
Structural Insights Into the Effector - Immunity System TSE1/TSI1 From Pseudomonas Aeruginosa. Plos One V. 7 40453 2012.
ISSN: ESSN 1932-6203
PubMed: 22792331
DOI: 10.1371/JOURNAL.PONE.0040453
Page generated: Sun Jul 21 13:44:19 2024
|