Atomistry » Chlorine » PDB 4fbx-4fls » 4fi4
Atomistry »
  Chlorine »
    PDB 4fbx-4fls »
      4fi4 »

Chlorine in PDB 4fi4: Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31

Protein crystallography data

The structure of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31, PDB code: 4fi4 was solved by Y.Patskovsky, R.Toro, R.Bhosle, B.Hillerich, R.D.Seidel, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.74 / 2.00
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 137.617, 137.617, 264.696, 90.00, 90.00, 90.00
R / Rfree (%) 14.9 / 20.4

Other elements in 4fi4:

The structure of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 (pdb code 4fi4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31, PDB code: 4fi4:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 4fi4

Go back to Chlorine Binding Sites List in 4fi4
Chlorine binding site 1 out of 5 in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl503

b:48.3
occ:1.00
NE A:ARG49 2.9 30.9 1.0
O A:HOH615 2.9 50.0 1.0
N A:VAL9 3.0 26.6 1.0
CG A:ARG49 3.4 43.2 1.0
CD A:ARG49 3.5 31.7 1.0
O A:VAL9 3.6 36.3 1.0
CA A:LYS8 3.7 37.7 0.5
CB A:LYS8 3.8 41.6 0.5
CA A:LYS8 3.8 38.7 0.5
CZ A:ARG49 3.8 35.4 1.0
C A:LYS8 3.8 34.3 1.0
CA A:VAL9 3.9 29.6 1.0
CB A:VAL9 3.9 27.9 1.0
CD A:LYS8 3.9 62.9 0.5
NH2 A:ARG49 4.0 38.2 1.0
CB A:LYS8 4.2 39.1 0.5
C A:VAL9 4.2 29.2 1.0
O A:HOH883 4.2 49.9 1.0
CG2 A:VAL9 4.2 30.7 1.0
CG A:LYS8 4.5 58.9 0.5
CB A:ARG49 4.8 28.4 1.0
CG A:LYS8 4.8 43.7 0.5
O A:ALA7 4.8 28.4 1.0
CE A:LYS8 4.9 41.3 0.5

Chlorine binding site 2 out of 5 in 4fi4

Go back to Chlorine Binding Sites List in 4fi4
Chlorine binding site 2 out of 5 in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:49.4
occ:1.00
N A:ILE129 3.1 27.9 1.0
O A:HOH745 3.2 42.6 1.0
CE1 A:HIS190 3.6 40.8 1.0
CG1 A:ILE129 3.6 35.6 1.0
NH2 B:ARG137 3.7 41.3 1.0
CA A:THR128 3.7 27.8 1.0
CB A:THR128 3.8 34.4 1.0
CD1 A:ILE129 3.8 31.5 1.0
CB A:ILE129 3.9 29.6 1.0
C A:THR128 3.9 32.7 1.0
CA A:ILE129 4.1 31.1 1.0
NE2 A:HIS190 4.2 39.5 1.0
OE1 A:GLU130 4.2 29.6 1.0
CG2 A:THR128 4.4 30.1 1.0
CZ B:ARG137 4.6 43.9 1.0
ND1 A:HIS190 4.7 39.0 1.0
OG A:SER151 4.9 51.7 1.0

Chlorine binding site 3 out of 5 in 4fi4

Go back to Chlorine Binding Sites List in 4fi4
Chlorine binding site 3 out of 5 in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl508

b:36.4
occ:0.50
O A:HOH785 2.8 48.1 1.0
N A:VAL82 3.4 25.6 1.0
CB A:VAL82 3.7 24.6 1.0
CA A:GLY80 3.7 28.8 1.0
N A:PRO81 3.7 24.3 1.0
C A:GLY80 3.7 25.2 1.0
CD A:PRO81 3.8 25.1 1.0
CG2 A:VAL82 3.8 20.9 1.0
CA A:VAL82 4.1 22.8 1.0
N A:ALA83 4.3 20.0 1.0
O A:GLY79 4.3 31.0 1.0
O A:GLY80 4.4 24.2 1.0
C A:PRO81 4.4 22.2 1.0
CA A:PRO81 4.6 20.6 1.0
C A:VAL82 4.7 24.2 1.0
N A:GLY80 4.9 25.9 1.0
CG A:PRO81 5.0 30.9 1.0
CG1 A:VAL82 5.0 24.3 1.0
CB A:PRO81 5.0 21.9 1.0

Chlorine binding site 4 out of 5 in 4fi4

Go back to Chlorine Binding Sites List in 4fi4
Chlorine binding site 4 out of 5 in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl503

b:54.3
occ:1.00
N B:ILE129 3.1 28.0 1.0
O B:HOH853 3.2 53.7 1.0
O B:HOH804 3.2 49.3 1.0
CA B:THR128 3.5 31.7 1.0
CB B:THR128 3.6 33.4 1.0
NH2 A:ARG137 3.7 38.9 1.0
CE1 B:HIS190 3.7 40.2 1.0
CG1 B:ILE129 3.8 33.3 1.0
C B:THR128 3.8 29.8 1.0
CB B:ILE129 3.9 34.5 1.0
CA B:ILE129 4.1 26.8 1.0
CD1 B:ILE129 4.1 32.5 1.0
CG2 B:THR128 4.3 38.0 1.0
OE1 B:GLU130 4.3 31.0 1.0
NE2 B:HIS190 4.3 40.8 1.0
CZ A:ARG137 4.5 31.0 1.0
O B:GLU127 4.8 35.1 1.0
OG1 B:THR128 4.8 39.6 1.0
N B:THR128 4.8 26.7 1.0
ND1 B:HIS190 4.9 46.0 1.0

Chlorine binding site 5 out of 5 in 4fi4

Go back to Chlorine Binding Sites List in 4fi4
Chlorine binding site 5 out of 5 in the Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Mannonate Dehydratase PRK15072 (Target Efi- 502214) From Caulobacter Sp. K31 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl505

b:38.0
occ:1.00
O C:HOH775 2.8 41.9 1.0
N C:VAL82 3.3 23.1 1.0
CB C:VAL82 3.6 30.5 1.0
C C:GLY80 3.7 33.3 1.0
N C:PRO81 3.7 26.7 1.0
CD C:PRO81 3.7 29.2 1.0
CA C:GLY80 3.7 32.3 1.0
CG2 C:VAL82 3.8 23.7 1.0
CA C:VAL82 4.0 32.1 1.0
N C:ALA83 4.2 26.8 1.0
O C:GLY80 4.3 28.6 1.0
O C:GLY79 4.3 31.0 1.0
C C:PRO81 4.4 28.5 1.0
CA C:PRO81 4.6 25.0 1.0
C C:VAL82 4.7 31.0 1.0
CG1 C:VAL82 4.9 24.3 1.0
N C:GLY80 4.9 26.5 1.0
CG C:PRO81 4.9 34.4 1.0
CB C:PRO81 5.0 27.7 1.0

Reference:

Y.Patskovsky, R.Toro, R.Bhosle, B.Hillerich, R.D.Seidel, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo. Crystal Structure of Enolase PRK15072 (Target Efi-502214) From Caulobacter Sp. K31 To Be Published.
Page generated: Sun Jul 21 13:45:51 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy