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Chlorine in PDB 4fu3: Cid of Human RPRD1B

Protein crystallography data

The structure of Cid of Human RPRD1B, PDB code: 4fu3 was solved by Z.Ni, C.Xu, W.Tempel, M.El Bakkouri, P.Loppnau, X.Guo, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, J.F.Greenblatt, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.77 / 1.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 57.752, 79.784, 108.666, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 25.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Cid of Human RPRD1B (pdb code 4fu3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Cid of Human RPRD1B, PDB code: 4fu3:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4fu3

Go back to Chlorine Binding Sites List in 4fu3
Chlorine binding site 1 out of 3 in the Cid of Human RPRD1B


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Cid of Human RPRD1B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:37.3
occ:1.00
NE A:ARG114 3.0 33.7 1.0
NH2 A:ARG114 3.4 29.3 1.0
CZ A:ARG114 3.7 40.4 1.0
CG A:ARG114 3.9 32.2 1.0
CD A:ARG114 4.1 35.7 1.0
NH1 A:ARG114 5.0 33.0 1.0

Chlorine binding site 2 out of 3 in 4fu3

Go back to Chlorine Binding Sites List in 4fu3
Chlorine binding site 2 out of 3 in the Cid of Human RPRD1B


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Cid of Human RPRD1B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:54.4
occ:1.00
N A:GLU6 3.4 41.5 1.0
CA A:SER5 3.8 45.2 1.0
C A:SER5 4.1 45.6 1.0
CB A:GLU6 4.2 41.9 1.0
CG A:GLU6 4.2 46.2 1.0
CB A:SER5 4.4 47.5 1.0
CA A:GLU6 4.4 40.3 1.0
O A:PHE4 4.9 50.0 1.0
N A:SER5 4.9 46.1 1.0
CE2 A:PHE4 4.9 53.8 1.0
CD A:GLU6 4.9 69.7 1.0

Chlorine binding site 3 out of 3 in 4fu3

Go back to Chlorine Binding Sites List in 4fu3
Chlorine binding site 3 out of 3 in the Cid of Human RPRD1B


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Cid of Human RPRD1B within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:32.8
occ:1.00
NE B:ARG114 3.1 29.2 1.0
NH2 B:ARG114 3.2 18.3 1.0
CZ B:ARG114 3.6 35.2 1.0
CG B:ARG114 4.2 22.6 1.0
CD B:ARG114 4.2 24.6 1.0
NH1 B:ARG114 4.9 27.4 1.0

Reference:

Z.Ni, C.Xu, W.Tempel, M.El Bakkouri, P.Loppnau, X.Guo, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, J.F.Greenblatt. Cid of Human RPRD1B To Be Published.
Page generated: Sat Dec 12 10:38:06 2020

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