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Chlorine in PDB 4fz4: Crystal Structure of HP0197-18KD

Protein crystallography data

The structure of Crystal Structure of HP0197-18KD, PDB code: 4fz4 was solved by Z.Yuan, X.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.82 / 2.44
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 49.235, 87.601, 38.540, 90.00, 90.00, 90.00
R / Rfree (%) 22.2 / 26.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of HP0197-18KD (pdb code 4fz4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of HP0197-18KD, PDB code: 4fz4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4fz4

Go back to Chlorine Binding Sites List in 4fz4
Chlorine binding site 1 out of 2 in the Crystal Structure of HP0197-18KD


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of HP0197-18KD within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:71.5
occ:1.00
NE2 A:GLN162 3.1 31.6 1.0
OH A:TYR179 3.2 28.0 1.0
CE A:LYS166 3.2 49.1 1.0
CZ A:TYR179 3.4 26.4 1.0
O A:LYS166 3.5 50.1 1.0
CE1 A:TYR179 3.7 19.1 1.0
CG A:LYS166 3.8 81.0 1.0
CD A:LYS166 3.8 82.2 1.0
O A:HOH416 3.9 61.1 1.0
C A:LYS166 3.9 52.8 1.0
CD A:GLN162 3.9 31.4 1.0
NZ A:LYS166 4.0 40.8 1.0
CA A:SER167 4.0 33.0 1.0
CE2 A:TYR179 4.0 20.8 1.0
O A:LYS161 4.1 40.3 1.0
OE1 A:GLN162 4.2 44.7 1.0
N A:SER167 4.2 42.7 1.0
O A:LEU160 4.4 21.2 1.0
C A:SER167 4.5 34.9 1.0
O A:HIS159 4.5 37.6 1.0
CD1 A:TYR179 4.6 28.9 1.0
N A:ILE168 4.7 36.5 1.0
CD2 A:TYR179 4.8 17.7 1.0
CA A:LYS166 4.9 60.4 1.0
CB A:LYS166 4.9 73.2 1.0
C A:LYS161 4.9 26.3 1.0
CG2 A:ILE168 4.9 24.8 1.0
C A:LEU160 4.9 35.6 1.0
CA A:GLN162 4.9 31.7 1.0

Chlorine binding site 2 out of 2 in 4fz4

Go back to Chlorine Binding Sites List in 4fz4
Chlorine binding site 2 out of 2 in the Crystal Structure of HP0197-18KD


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of HP0197-18KD within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:64.7
occ:1.00
O A:GLU183 2.8 34.4 1.0
NH2 A:ARG190 3.1 39.9 1.0
CB A:GLU186 3.4 45.0 1.0
CA A:GLU183 3.4 33.2 1.0
C A:GLU183 3.5 33.7 1.0
CG A:GLU183 3.6 33.2 1.0
ND1 A:HIS159 3.7 32.3 1.0
CE1 A:HIS159 3.8 42.2 1.0
N A:ALA187 3.8 29.5 1.0
CG A:HIS159 3.9 36.1 1.0
NH1 A:ARG190 3.9 26.9 1.0
CZ A:ARG190 4.0 30.7 1.0
NE2 A:HIS159 4.0 37.0 1.0
CD2 A:HIS159 4.0 34.1 1.0
CG A:GLU186 4.0 62.1 1.0
CB A:GLU183 4.1 31.6 1.0
CB A:ALA187 4.2 28.4 1.0
CB A:HIS159 4.5 39.5 1.0
CA A:ALA187 4.5 22.5 1.0
C A:GLU186 4.5 32.4 1.0
CA A:GLU186 4.5 25.0 1.0
O A:ARG182 4.5 30.4 1.0
N A:GLU183 4.5 24.2 1.0
N A:ALA184 4.8 29.1 1.0
CD A:GLU183 4.9 30.4 1.0
C A:ARG182 4.9 20.6 1.0
N A:GLU186 4.9 24.8 1.0

Reference:

Z.Z.Yuan, X.J.Yan, A.D.Zhang, B.Chen, Y.Q.Shen, M.L.Jin. Molecular Mechanism By Which Surface Antigen HP0197 Mediates Host Cell Attachment in the Pathogenic Bacteria Streptococcus Suis J.Biol.Chem. V. 288 956 2013.
ISSN: ISSN 0021-9258
PubMed: 23184929
DOI: 10.1074/JBC.M112.388686
Page generated: Sat Dec 12 10:38:20 2020

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