Chlorine in PDB 4g0r: Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles

The structure of Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles, PDB code: 4g0r was solved by S.Halder, M.Agbandje-Mckenna, H.-J.Nam, L.Govindasamy, M.Vogel, C.Dinsart, N.Salome, R.Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.70
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	255.400, 350.400, 271.600, 90.00, 90.34, 90.00
R / Rfree (%)	21.6 / 21.7

The structure of Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Sodium	(Na)	2 atoms

The binding sites of Chlorine atom in the Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles (pdb code 4g0r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles, PDB code: 4g0r:

Chlorine binding site 1 out of 1 in the Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Replication Defective Particles within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl608 b:53.8 occ:1.00 N A:ASP375 3.3 34.2 1.0 N A:HIS374 3.4 34.7 1.0 CB A:HIS374 3.7 32.5 1.0 CA A:HIS374 3.9 33.4 1.0 CB A:ASP375 4.0 38.2 1.0 CG A:ASP375 4.0 43.1 1.0 C A:HIS374 4.1 33.6 1.0 OD2 A:ASP375 4.1 45.0 1.0 C A:ASP373 4.1 36.8 1.0 CA A:ASP375 4.3 34.8 1.0 CD2 A:HIS374 4.4 33.1 1.0 CA A:ASP373 4.4 37.9 1.0 CG A:HIS374 4.4 33.8 1.0 O A:GLU372 4.5 38.1 1.0 OD1 A:ASP375 4.5 45.4 1.0

S.Halder, H.J.Nam, L.Govindasamy, M.Vogel, C.Dinsart, N.Salome, R.Mckenna, M.Agbandje-Mckenna. Structural Characterization of H-1 Parvovirus: Comparison of Infectious Virions to Empty Capsids. J.Virol. V. 87 5128 2013.
ISSN: ISSN 0022-538X
PubMed: 23449783
DOI: 10.1128/JVI.03416-12