Chlorine in PDB 4g65: Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus

The structure of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus, PDB code: 4g65 was solved by E.V.Filippova, Z.Wawrzak, T.Skarina, O.Onopriyenko, A.Edwards, A.Savchenko, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.67 / 2.09
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	68.112, 225.256, 139.516, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 22.8

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Chlorine atom in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus (pdb code 4g65). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 14 binding sites of Chlorine where determined in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus, PDB code: 4g65:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl503 b:36.8 occ:1.00 NH2 A:ARG227 3.3 30.7 1.0 N A:LEU166 3.4 41.2 1.0 NH1 A:ARG227 3.4 30.5 1.0 CB A:LEU166 3.4 36.6 1.0 N A:TYR161 3.5 43.1 1.0 CD A:PRO165 3.6 45.2 1.0 CA A:ALA160 3.6 23.1 1.0 CG A:LEU166 3.6 35.5 1.0 N A:PRO165 3.7 46.7 1.0 CA A:GLY164 3.7 49.2 1.0 C A:GLY164 3.7 48.5 1.0 CZ A:ARG227 3.9 29.8 1.0 CD1 A:TYR161 3.9 43.9 1.0 CE1 A:TYR161 3.9 45.1 1.0 CA A:LEU166 3.9 39.1 1.0 CD1 A:LEU166 3.9 33.6 1.0 O A:TYR161 4.0 48.1 1.0 CB A:ALA160 4.0 23.9 1.0 C A:ALA160 4.1 23.0 1.0 N A:VAL167 4.3 41.8 1.0 CG A:PRO165 4.3 44.2 1.0 O A:GLY164 4.4 49.7 1.0 C A:PRO165 4.4 43.7 1.0 CG A:TYR161 4.5 46.2 1.0 CZ A:TYR161 4.5 48.8 1.0 CG2 A:VAL167 4.5 41.9 1.0 N A:GLY164 4.6 51.8 1.0 CA A:PRO165 4.6 46.7 1.0 C A:LEU166 4.6 40.3 1.0 CA A:TYR161 4.7 45.3 1.0 O A:LYS159 4.7 21.8 1.0 N A:ALA160 4.7 23.1 1.0 C A:TYR161 4.8 48.3 1.0

Chlorine binding site 2 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl504 b:29.1 occ:1.00 N A:VAL185 3.1 22.9 1.0 NE A:ARG175 3.6 56.0 1.0 CB A:ARG184 3.7 28.4 1.0 CA A:ARG184 3.7 25.1 1.0 CG A:ARG175 3.9 52.7 1.0 CB A:VAL185 3.9 22.3 1.0 C A:ARG184 3.9 23.6 1.0 CB A:LEU171 4.0 37.9 1.0 CA A:VAL185 4.0 21.6 1.0 CG2 A:VAL185 4.1 22.5 1.0 CD A:ARG175 4.1 54.8 1.0 CD1 A:LEU171 4.3 37.6 1.0 CZ A:ARG175 4.3 58.5 1.0 NH2 A:ARG175 4.4 59.7 1.0 O A:VAL185 4.5 22.2 1.0 O A:LEU171 4.5 38.9 1.0 NE A:ARG184 4.6 37.8 1.0 CG A:LEU171 4.6 37.5 1.0 CG A:ARG184 4.7 30.2 1.0 C A:VAL185 4.8 21.4 1.0 C A:LEU171 4.9 39.5 1.0 CA A:LEU171 4.9 38.4 1.0 CD2 A:LEU171 4.9 36.0 1.0

Chlorine binding site 3 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl505 b:48.6 occ:1.00 ND2 A:ASN391 2.9 31.4 1.0 N A:ASP388 3.2 26.7 1.0 CA A:GLY387 3.6 25.8 1.0 CG A:ASN391 3.8 30.9 1.0 CB A:ASN391 3.9 28.7 1.0 C A:GLY387 3.9 25.8 1.0 CG A:ASP388 3.9 30.4 1.0 OD1 A:ASP388 4.1 28.8 1.0 CB A:ASP388 4.1 28.7 1.0 OD2 A:ASP388 4.1 32.1 1.0 NE2 A:GLN430 4.3 25.7 1.0 CA A:ASP388 4.3 27.1 1.0 N A:GLY387 4.7 25.4 1.0 OD1 A:ASN391 5.0 32.3 1.0

Chlorine binding site 4 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl506 b:51.8 occ:1.00 NE2 A:GLN40 3.2 46.1 1.0 N A:VAL47 3.2 27.6 1.0 CA A:ARG46 3.4 32.2 1.0 CB A:ARG46 3.7 36.0 1.0 O A:VAL47 3.7 27.3 1.0 C A:ARG46 3.8 29.1 1.0 CG A:ARG46 4.1 41.7 1.0 CG2 A:VAL47 4.2 28.2 1.0 CD A:GLN40 4.3 46.5 1.0 CA A:VAL47 4.3 26.8 1.0 C A:VAL47 4.4 26.6 1.0 OE1 A:GLN40 4.5 48.3 1.0 O A:LEU45 4.6 34.1 1.0 N A:ARG46 4.7 32.1 1.0 CB A:VAL47 4.8 27.1 1.0 CD A:ARG46 4.8 47.7 1.0

Chlorine binding site 5 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl507 b:30.9 occ:1.00 O A:HOH603 3.0 13.5 1.0 N A:VAL343 3.4 20.5 1.0 CA A:GLY342 3.8 21.6 1.0 CG2 A:VAL343 3.9 21.4 1.0 C A:GLY342 4.0 20.9 1.0 N A:GLY342 4.2 21.2 1.0 CA A:VAL343 4.5 20.4 1.0 CB A:VAL343 4.6 21.0 1.0 CG1 A:VAL343 4.6 22.6 1.0 O A:VAL339 4.9 21.8 1.0 N A:ILE344 5.0 18.1 1.0

Chlorine binding site 6 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl508 b:28.4 occ:1.00 O A:HOH637 2.9 14.2 1.0 CB A:PRO231 3.4 28.4 1.0 NE2 A:GLN138 3.5 16.5 0.5 OH A:TYR255 3.5 20.3 1.0 CA A:PRO231 4.2 28.4 1.0 CD A:GLN138 4.4 16.2 0.5 CG A:PRO140 4.4 18.6 1.0 CZ A:TYR255 4.5 19.4 1.0 O A:ILE137 4.6 15.1 1.0 CD A:PRO140 4.6 17.7 1.0 CG A:PRO231 4.6 31.4 1.0 CE2 A:TYR255 4.7 18.6 1.0 O A:HOH613 4.8 22.1 1.0 O A:GLN138 4.9 15.9 0.5 OE1 A:GLN138 4.9 16.3 0.5 CA A:GLN138 4.9 15.4 0.5 N A:TYR232 4.9 22.3 1.0 CA A:GLN138 5.0 15.4 0.5

Chlorine binding site 7 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl509 b:46.7 occ:1.00 N A:ILE202 3.2 34.9 1.0 NH1 A:ARG190 3.4 36.4 1.0 O A:HOH804 3.5 36.8 1.0 O A:ILE202 3.6 33.9 1.0 O A:HOH808 3.7 34.8 1.0 CA A:THR201 3.8 33.0 1.0 CG2 A:THR201 3.9 30.2 1.0 C A:THR201 4.0 33.9 1.0 CA A:ILE202 4.1 35.4 1.0 NH2 A:ARG190 4.2 34.9 1.0 CZ A:ARG190 4.3 34.6 1.0 CB A:ILE202 4.3 38.4 1.0 C A:ILE202 4.3 33.6 1.0 CB A:THR201 4.4 31.1 1.0 CG1 A:ILE202 4.6 40.9 1.0 O A:THR200 4.7 36.0 1.0 OG1 A:THR201 4.8 31.2 1.0 OE2 A:GLU204 4.9 39.7 1.0 N A:THR201 5.0 33.9 1.0

Chlorine binding site 8 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl502 b:33.6 occ:1.00 NH1 B:ARG227 3.2 29.2 1.0 N B:TYR161 3.3 34.5 1.0 N B:LEU166 3.3 35.6 1.0 CA B:GLY164 3.4 38.5 1.0 CB B:LEU166 3.5 33.5 1.0 C B:GLY164 3.6 38.0 1.0 CA B:ALA160 3.7 31.2 1.0 O B:TYR161 3.7 36.4 1.0 CD B:PRO165 3.7 35.7 1.0 N B:PRO165 3.7 37.1 1.0 N B:VAL167 3.8 38.0 1.0 CA B:LEU166 3.9 35.1 1.0 CG2 B:VAL167 3.9 38.2 1.0 CG B:LEU166 3.9 32.9 1.0 C B:ALA160 4.0 32.6 1.0 CB B:ALA160 4.0 31.4 1.0 CD1 B:TYR161 4.1 41.2 1.0 O B:GLY164 4.1 38.8 1.0 CE1 B:TYR161 4.2 42.8 1.0 N B:GLY164 4.3 40.5 1.0 CZ B:ARG227 4.3 28.2 1.0 CA B:TYR161 4.3 36.0 1.0 C B:LEU166 4.4 35.9 1.0 CD1 B:LEU166 4.4 31.2 1.0 CG B:TYR161 4.4 40.0 1.0 C B:PRO165 4.4 37.0 1.0 C B:TYR161 4.5 37.6 1.0 CD B:ARG227 4.6 29.9 1.0 CA B:PRO165 4.6 37.4 1.0 CG B:PRO165 4.6 35.1 1.0 CB B:VAL167 4.7 40.1 1.0 CZ B:TYR161 4.7 44.1 1.0 CA B:VAL167 4.8 39.2 1.0 O B:LYS159 4.8 27.2 1.0 NE B:ARG227 4.8 28.4 1.0 CD2 B:TYR161 4.9 44.0 1.0 N B:ALA160 4.9 29.1 1.0 CB B:TYR161 5.0 37.5 1.0

Chlorine binding site 9 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl503 b:16.0 occ:1.00 O B:HOH605 3.0 11.8 1.0 O B:HOH608 3.1 15.0 1.0 NE2 B:GLN84 3.4 14.0 1.0 CD2 B:PHE87 3.9 13.7 1.0 CE2 B:PHE87 4.1 14.3 1.0 OE1 B:GLN84 4.1 14.3 1.0 CD B:GLN84 4.2 14.1 1.0 OG1 B:THR88 4.3 13.0 1.0 CG B:PRO118 4.3 16.6 1.0 CB A:ALA116 4.4 15.7 1.0 O B:GLY115 4.5 17.5 1.0 CB B:PRO118 4.6 16.9 1.0 CA A:ALA116 4.7 15.6 1.0 O A:ALA116 4.8 15.7 1.0 CD B:PRO118 4.9 16.5 1.0

Chlorine binding site 10 out of 14 in the Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl504 b:29.6 occ:0.70 O B:HOH660 2.8 15.1 1.0 O B:HOH699 3.1 30.1 1.0 NH2 B:ARG100 3.3 24.2 1.0 NE B:ARG100 3.5 24.2 1.0 CB B:PRO350 3.7 22.7 1.0 CZ B:ARG100 3.9 24.2 1.0 CB B:PRO125 4.1 19.3 1.0 CG B:PRO350 4.2 23.8 1.0 CG B:PRO125 4.3 18.3 1.0 CG B:GLN351 4.5 27.8 1.0 C B:PRO350 4.5 21.3 1.0 N B:GLN351 4.5 22.7 1.0 CD B:ARG100 4.7 23.0 1.0 NH1 B:ARG98 4.7 17.0 1.0 CA B:PRO350 4.8 21.3 1.0 OE1 B:GLN331 4.8 50.8 1.0 O B:PRO350 4.9 20.1 1.0 CA B:GLN351 4.9 23.5 1.0

E.V.Filippova, Z.Wawrzak, T.Skarina, O.Onopriyenko, A.Edwards, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Potassium Transporter Peripheral Membrane Component (Trka) From Vibrio Vulnificus. To Be Published.