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Chlorine in PDB 4g9b: Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid

Enzymatic activity of Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid

All present enzymatic activity of Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid:
5.4.2.6;

Protein crystallography data

The structure of Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid, PDB code: 4g9b was solved by M.W.Vetting, R.Toro, R.Bhosle, N.F.Al Obaidi, L.L.Morisco, S.R.Wasserman, S.Sojitra, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, D.Dunaway-Mariano, K.N.Allen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.59 / 1.70
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 129.168, 129.168, 85.766, 90.00, 90.00, 120.00
R / Rfree (%) 16.6 / 20.4

Other elements in 4g9b:

The structure of Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid also contains other interesting chemical elements:

Magnesium (Mg) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid (pdb code 4g9b). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid, PDB code: 4g9b:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4g9b

Go back to Chlorine Binding Sites List in 4g9b
Chlorine binding site 1 out of 2 in the Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:29.2
occ:1.00
 OG A:SER116 3.0 23.6 1.0
O A:HOH463 3.1 34.0 1.0
N A:ASP11 3.4 17.9 1.0
CB A:LEU10 3.5 22.9 0.3
CB A:LEU10 3.5 15.8 0.7
OD1 A:ASP9 3.5 18.5 1.0
O A:HOH403 3.6 22.0 1.0
CB A:SER116 3.7 22.6 1.0
N A:LEU10 3.9 22.2 0.3
N A:LEU10 3.9 14.9 0.7
CA A:SER116 3.9 18.3 1.0
N A:VAL117 4.0 19.8 1.0
CB A:ASP11 4.0 22.3 1.0
CA A:LEU10 4.0 21.8 0.7
CA A:LEU10 4.0 21.2 0.3
C A:LEU10 4.2 16.1 0.7
C A:LEU10 4.2 19.1 0.3
O A:HOH579 4.2 46.8 1.0
CA A:ASP11 4.3 19.7 1.0
N A:SER118 4.4 22.7 1.0
CG A:LEU10 4.4 22.9 0.7
CB A:SER118 4.4 24.9 1.0
C A:SER116 4.4 20.2 1.0
CD2 A:LEU10 4.6 23.5 0.7
CG A:LEU10 4.6 21.9 0.3
CG A:ASP9 4.7 19.3 1.0
CG2 A:VAL117 4.7 33.6 1.0
CD1 A:LEU10 4.9 21.0 0.3
CD2 A:LEU10 5.0 25.4 0.3

Chlorine binding site 2 out of 2 in 4g9b

Go back to Chlorine Binding Sites List in 4g9b
Chlorine binding site 2 out of 2 in the Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl308

b:54.6
occ:1.00
 N A:GLN174 3.1 16.5 1.0
O A:HOH546 3.5 48.2 1.0
O A:HOH429 3.5 24.6 1.0
CA A:ALA173 3.8 21.6 1.0
CB A:GLN174 3.8 19.0 1.0
C A:ALA173 4.0 17.0 1.0
O A:HOH556 4.0 49.0 1.0
CA A:GLN174 4.1 19.7 1.0
CB A:ALA173 4.1 24.3 1.0
CD2 A:LEU194 4.5 25.2 1.0
O A:HOH560 4.6 43.8 1.0
O A:ASP172 4.7 21.4 1.0
O A:HOH548 4.9 51.5 1.0
O A:HOH443 5.0 27.5 1.0

Reference:

M.W.Vetting, R.Toro, R.Bhosle, N.F.Al Obaidi, L.L.Morisco, S.R.Wasserman, S.Sojitra, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, D.Dunaway-Mariano, K.N.Allen, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, with Bound Mg, Open Lid To Be Published.
Page generated: Sun Jul 21 14:23:50 2024

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