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Chlorine in PDB 4g9p: Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus

Enzymatic activity of Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus

All present enzymatic activity of Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus:
1.17.7.1;

Protein crystallography data

The structure of Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus, PDB code: 4g9p was solved by I.Rekittke, H.Jomaa, U.Ermler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.78 / 1.55
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 63.650, 63.650, 442.270, 90.00, 90.00, 120.00
R / Rfree (%) 17.7 / 20.3

Other elements in 4g9p:

The structure of Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus also contains other interesting chemical elements:

Potassium (K) 1 atom
Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus (pdb code 4g9p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus, PDB code: 4g9p:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4g9p

Go back to Chlorine Binding Sites List in 4g9p
Chlorine binding site 1 out of 2 in the Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:19.1
occ:1.00
HD22 A:ASN31 2.3 17.8 1.0
O A:HOH717 3.1 29.0 1.0
K A:K505 3.1 18.9 1.0
HB2 A:ARG271 3.1 21.1 1.0
ND2 A:ASN31 3.2 14.8 1.0
O A:HOH621 3.2 23.4 1.0
HG2 A:PRO265 3.4 17.5 1.0
HD21 A:ASN31 3.6 17.8 1.0
H A:ARG271 3.6 21.6 1.0
HB2 A:PRO265 3.7 18.7 1.0
HB3 A:PRO265 3.8 18.7 1.0
HD3 A:ARG271 3.9 18.6 1.0
N A:ARG271 3.9 18.0 1.0
HA A:ARG271 4.0 16.6 1.0
CB A:ARG271 4.0 17.6 1.0
CB A:PRO265 4.1 15.6 1.0
CG A:ASN31 4.1 14.3 1.0
CG A:PRO265 4.1 14.6 1.0
OD1 A:ASN31 4.2 16.9 1.0
CA A:ARG271 4.2 13.8 1.0
O A:GLU269 4.3 21.1 1.0
HE22 A:GLN43 4.3 19.8 1.0
HA A:PRO270 4.4 27.8 1.0
HG3 A:PRO265 4.5 17.5 1.0
HB3 A:ARG271 4.6 21.1 1.0
O A:HOH701 4.6 32.6 1.0
C A:PRO270 4.6 14.1 1.0
HE21 A:GLN43 4.7 19.8 1.0
CD A:ARG271 4.8 15.5 1.0
NE2 A:GLN43 4.8 16.5 1.0
CG A:ARG271 4.9 17.7 1.0

Chlorine binding site 2 out of 2 in 4g9p

Go back to Chlorine Binding Sites List in 4g9p
Chlorine binding site 2 out of 2 in the Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of the Gcpe-Mecpp (Ispg) Complex From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl507

b:12.2
occ:0.58
HE21 A:GLN27 2.2 20.7 1.0
HE A:ARG56 2.3 16.9 1.0
HH21 A:ARG56 2.4 17.6 1.0
HG3 A:ARG260 2.5 15.9 1.0
NE2 A:GLN27 3.0 17.2 1.0
NE A:ARG56 3.1 14.1 1.0
HG3 A:GLN27 3.1 20.2 1.0
HB3 A:ARG56 3.1 14.7 1.0
NH2 A:ARG56 3.2 14.7 1.0
HB2 A:MET29 3.3 18.0 1.0
O A:SER28 3.4 16.4 1.0
HE1 A:HIS227 3.4 18.8 1.0
HB2 A:ARG260 3.4 14.1 1.0
HB2 A:ARG56 3.4 14.7 1.0
HE22 A:GLN27 3.5 20.7 1.0
CG A:ARG260 3.5 13.3 1.0
C A:SER28 3.5 15.5 1.0
CZ A:ARG56 3.6 13.8 1.0
HA A:SER28 3.7 15.0 1.0
CB A:ARG56 3.7 12.2 1.0
H A:SER28 3.8 14.4 1.0
N A:SER28 3.8 12.0 1.0
HB2 A:GLN27 3.8 19.6 1.0
CG A:GLN27 3.8 16.8 1.0
CD A:GLN27 3.9 26.3 1.0
CA A:SER28 3.9 12.5 1.0
HH22 A:ARG56 3.9 17.6 1.0
CB A:ARG260 4.0 11.8 1.0
HG2 A:ARG260 4.0 15.9 1.0
H A:ARG56 4.1 15.2 1.0
N A:MET29 4.1 11.7 1.0
HD2 A:ARG260 4.1 18.1 1.0
CD A:ARG56 4.2 13.6 1.0
CB A:MET29 4.2 15.0 1.0
CE1 A:HIS227 4.3 15.7 1.0
C A:GLN27 4.3 11.2 1.0
CB A:GLN27 4.3 16.4 1.0
HB3 A:ARG260 4.3 14.1 1.0
CD A:ARG260 4.3 15.1 1.0
HD3 A:ARG56 4.3 16.3 1.0
HA A:MET29 4.4 15.8 1.0
CA A:MET29 4.5 13.1 1.0
CG A:ARG56 4.6 14.8 1.0
HH21 A:ARG141 4.6 26.2 1.0
H A:MET29 4.6 14.0 1.0
HG2 A:GLN27 4.6 20.2 1.0
N A:ARG56 4.7 12.7 1.0
NE A:ARG260 4.7 13.1 1.0
HE2 A:HIS227 4.7 18.3 1.0
HB3 A:MET29 4.7 18.0 1.0
O A:HOH975 4.7 13.6 1.0
HH11 A:ARG260 4.7 16.9 1.0
O A:GLN27 4.8 15.3 1.0
HG2 A:ARG56 4.8 17.7 1.0
CA A:ARG56 4.9 13.0 1.0
NH1 A:ARG56 4.9 14.6 1.0
NE2 A:HIS227 4.9 15.3 1.0
CA A:GLN27 4.9 10.8 1.0
HD2 A:ARG56 5.0 16.3 1.0
NH1 A:ARG260 5.0 14.1 1.0
CZ A:ARG260 5.0 12.1 1.0

Reference:

I.Rekittke, H.Jomaa, U.Ermler. Structure of the Gcpe (Ispg)-Mecpp Complex From Thermus Thermophilus. Febs Lett. V. 586 3452 2012.
ISSN: ISSN 0014-5793
PubMed: 22967895
DOI: 10.1016/J.FEBSLET.2012.07.070
Page generated: Sun Jul 21 14:23:57 2024

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