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Chlorine in PDB 4gjv: Streptavidin-S112H

Protein crystallography data

The structure of Streptavidin-S112H, PDB code: 4gjv was solved by T.Heinisch, T.Schirmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.88 / 2.40
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.580, 57.580, 183.760, 90.00, 90.00, 90.00
R / Rfree (%) 18.5 / 23

Other elements in 4gjv:

The structure of Streptavidin-S112H also contains other interesting chemical elements:

Rhodium (Rh) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Streptavidin-S112H (pdb code 4gjv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Streptavidin-S112H, PDB code: 4gjv:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 4gjv

Go back to Chlorine Binding Sites List in 4gjv
Chlorine binding site 1 out of 4 in the Streptavidin-S112H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Streptavidin-S112H within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:49.9
occ:1.00
NE2 A:HIS87 2.6 39.6 1.0
CE1 A:HIS87 3.3 37.9 1.0
CD2 A:HIS87 3.7 32.7 1.0
ND1 A:HIS87 4.5 32.9 1.0
CG A:HIS87 4.7 32.6 1.0

Chlorine binding site 2 out of 4 in 4gjv

Go back to Chlorine Binding Sites List in 4gjv
Chlorine binding site 2 out of 4 in the Streptavidin-S112H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Streptavidin-S112H within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:60.7
occ:0.50
NH1 A:ARG84 3.4 51.0 1.0
NH2 A:ARG84 3.9 46.8 1.0
CZ A:ARG84 4.1 49.0 1.0

Chlorine binding site 3 out of 4 in 4gjv

Go back to Chlorine Binding Sites List in 4gjv
Chlorine binding site 3 out of 4 in the Streptavidin-S112H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Streptavidin-S112H within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:57.8
occ:1.00
N A:GLY48 3.5 30.5 1.0
CA A:GLY48 4.1 24.5 1.0
C A:VAL47 4.4 28.4 1.0
CA A:VAL47 4.5 25.1 1.0
CB A:VAL47 4.5 27.2 1.0
O A:GLY48 4.7 27.3 1.0
C A:GLY48 4.7 30.7 1.0

Chlorine binding site 4 out of 4 in 4gjv

Go back to Chlorine Binding Sites List in 4gjv
Chlorine binding site 4 out of 4 in the Streptavidin-S112H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Streptavidin-S112H within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:70.7
occ:1.00
NZ A:LYS80 3.1 45.6 1.0
O A:HOH513 4.0 33.4 1.0
O A:LYS80 4.1 26.9 1.0
CE A:LYS80 4.4 43.2 1.0
CG A:LYS80 4.4 25.8 1.0
CD A:LYS80 4.5 42.4 1.0
C A:LYS80 4.8 35.7 1.0
CA A:ASN81 4.8 30.1 1.0
O A:HOH509 4.9 29.5 1.0

Reference:

J.M.Zimbron, T.Heinisch, M.Schmid, D.Hamels, E.S.Nogueira, T.Schirmer, T.R.Ward. A Dual Anchoring Strategy For the Localization and Activation of Artificial Metalloenzymes Based on the Biotin-Streptavidin Technology. J.Am.Chem.Soc. V. 135 5384 2013.
ISSN: ISSN 0002-7863
PubMed: 23496309
DOI: 10.1021/JA309974S
Page generated: Sat Dec 12 10:39:52 2020

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