Chlorine in PDB 4gt0: Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421

The structure of Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421, PDB code: 4gt0 was solved by D.E.Klein, J.L.Choi, S.C.Harrison, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.48 / 2.57
Space group	P 63
Cell size a, b, c (Å), α, β, γ (°)	77.893, 77.893, 292.291, 90.00, 90.00, 120.00
R / Rfree (%)	17.7 / 21

The structure of Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421 also contains other interesting chemical elements:

Cadmium

(Cd)

4 atoms

The binding sites of Chlorine atom in the Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421 (pdb code 4gt0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421, PDB code: 4gt0:

Chlorine binding site 1 out of 1 in the Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Dengue Virus Serotype 1 Se Containing Stem to Residue 421 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl504 b:9.5 occ:1.00 O A:HOH608 2.5 9.2 1.0 N B:GLU311 3.3 5.9 1.0 N A:GLY102 3.4 3.5 1.0 CE1 A:PHE108 3.5 5.7 1.0 CA A:GLY102 3.6 5.1 1.0 CG B:GLU311 3.8 14.7 1.0 ND2 A:ASN103 3.9 6.1 1.0 CA B:LYS310 3.9 6.6 1.0 CB B:GLU311 3.9 9.9 1.0 CB B:LYS310 4.0 7.9 1.0 CA A:GLY100 4.0 6.1 1.0 C A:GLY100 4.1 5.9 1.0 CD1 A:PHE108 4.1 6.9 1.0 C B:LYS310 4.1 8.3 1.0 CA B:GLU311 4.2 9.6 1.0 N A:HIS101 4.2 3.9 1.0 N A:GLY100 4.3 6.2 1.0 C A:GLY102 4.4 11.8 1.0 N A:ASN103 4.5 8.4 1.0 O A:GLY100 4.5 10.3 1.0 C A:HIS101 4.6 5.1 1.0 CZ A:PHE108 4.6 4.3 1.0 CD B:GLU311 4.6 15.5 1.0 CG A:ASN103 4.6 6.3 1.0 OE2 B:GLU311 4.8 18.6 1.0 C A:ARG99 4.9 6.6 1.0 CA A:HIS101 5.0 6.8 1.0 OD1 A:ASN103 5.0 12.4 1.0

D.E.Klein, J.L.Choi, S.C.Harrison. Structure of A Dengue Virus Envelope Protein Late-Stage Fusion Intermediate. J.Virol. V. 87 2287 2013.
ISSN: ISSN 0022-538X
PubMed: 23236058
DOI: 10.1128/JVI.02957-12