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Chlorine in PDB 4hdt: Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile

Protein crystallography data

The structure of Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile, PDB code: 4hdt was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.45 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.200, 62.400, 56.880, 90.00, 109.59, 90.00
R / Rfree (%) 16 / 18.9

Other elements in 4hdt:

The structure of Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile also contains other interesting chemical elements:

Zinc (Zn) 5 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile (pdb code 4hdt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile, PDB code: 4hdt:

Chlorine binding site 1 out of 1 in 4hdt

Go back to Chlorine Binding Sites List in 4hdt
Chlorine binding site 1 out of 1 in the Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:15.8
occ:1.00
ZN A:ZN400 2.3 15.3 1.0
OE2 A:GLU46 3.3 17.5 1.0
NE A:ARG100 3.4 13.3 1.0
OE1 A:GLU348 3.4 21.9 1.0
NE2 A:HIS97 3.5 12.0 1.0
CD2 A:HIS97 3.6 11.4 1.0
CB A:ARG100 3.6 12.3 1.0
OE2 A:GLU348 3.7 23.1 1.0
CD A:GLU348 3.8 23.7 1.0
O A:HOH536 3.9 15.5 1.0
O A:ARG100 3.9 12.2 1.0
CD A:ARG100 4.1 13.1 1.0
CD A:PRO102 4.2 13.8 1.0
NH2 A:ARG100 4.3 13.6 1.0
CZ A:ARG100 4.3 13.4 1.0
C A:ARG100 4.3 11.7 1.0
CD A:GLU46 4.5 18.0 1.0
CG A:ARG100 4.5 12.6 1.0
CA A:ARG100 4.7 11.6 1.0
CA A:TYR101 4.7 12.0 1.0
N A:TYR101 4.8 11.4 1.0
CE1 A:HIS97 4.8 12.2 1.0
OE1 A:GLU46 4.8 18.0 1.0
CG A:GLU348 4.9 26.6 1.0
CG A:HIS97 4.9 10.9 1.0

Reference:

L.Baugh, I.Phan, D.W.Begley, M.C.Clifton, B.Armour, D.M.Dranow, B.M.Taylor, M.M.Muruthi, J.Abendroth, J.W.Fairman, D.Fox, S.H.Dieterich, B.L.Staker, A.S.Gardberg, R.Choi, S.N.Hewitt, A.J.Napuli, J.Myers, L.K.Barrett, Y.Zhang, M.Ferrell, E.Mundt, K.Thompkins, N.Tran, S.Lyons-Abbott, A.Abramov, A.Sekar, D.Serbzhinskiy, D.Lorimer, G.W.Buchko, R.Stacy, L.J.Stewart, T.E.Edwards, W.C.Van Voorhis, P.J.Myler. Increasing the Structural Coverage of Tuberculosis Drug Targets. Tuberculosis (Edinb) V. 95 142 2015.
ISSN: ISSN 1472-9792
PubMed: 25613812
DOI: 10.1016/J.TUBE.2014.12.003
Page generated: Sun Jul 21 15:44:26 2024

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