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Chlorine in PDB 4hg7: Crystal Structure of An MDM2/Nutlin-3A Complex

Protein crystallography data

The structure of Crystal Structure of An MDM2/Nutlin-3A Complex, PDB code: 4hg7 was solved by M.E.M.Noble, B.Anil, C.Riedinger, J.A.Endicott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.94 / 1.60
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 71.450, 71.450, 104.204, 90.00, 90.00, 120.00
R / Rfree (%) 17.3 / 21.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An MDM2/Nutlin-3A Complex (pdb code 4hg7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of An MDM2/Nutlin-3A Complex, PDB code: 4hg7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4hg7

Go back to Chlorine Binding Sites List in 4hg7
Chlorine binding site 1 out of 2 in the Crystal Structure of An MDM2/Nutlin-3A Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An MDM2/Nutlin-3A Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:17.1
occ:1.00
CL1 A:NUT201 0.0 17.1 1.0
C22 A:NUT201 1.8 13.7 1.0
C23 A:NUT201 2.7 13.2 1.0
C21 A:NUT201 2.7 13.6 1.0
CD2 A:LEU57 3.5 12.6 0.2
CG A:LEU57 3.5 13.3 0.2
CD1 A:ILE61 3.5 14.7 1.0
C20 A:NUT201 4.0 13.6 1.0
C24 A:NUT201 4.0 14.4 1.0
CZ A:PHE91 4.0 15.4 1.0
CE1 A:PHE91 4.1 14.4 1.0
CD1 A:LEU54 4.1 14.9 1.0
CB A:LEU57 4.2 16.5 0.8
CB A:LEU57 4.2 14.2 0.2
CG2 A:ILE99 4.3 11.8 1.0
C19 A:NUT201 4.5 13.5 1.0
CD1 A:LEU57 4.6 16.6 0.8
CD1 A:LEU57 4.8 14.5 0.2
CD1 A:ILE99 4.9 14.0 1.0
N A:GLY58 4.9 14.2 1.0
C A:LEU57 4.9 13.4 1.0
CE2 A:PHE86 5.0 15.0 1.0
CG1 A:ILE61 5.0 15.0 1.0

Chlorine binding site 2 out of 2 in 4hg7

Go back to Chlorine Binding Sites List in 4hg7
Chlorine binding site 2 out of 2 in the Crystal Structure of An MDM2/Nutlin-3A Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An MDM2/Nutlin-3A Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:18.2
occ:1.00
CL A:NUT201 0.0 18.2 1.0
C15 A:NUT201 1.8 14.9 1.0
C14 A:NUT201 2.7 13.5 1.0
C16 A:NUT201 2.8 14.4 1.0
CG A:HIS96 3.6 14.1 1.0
CD1 A:LEU54 3.7 14.9 1.0
CE1 A:TYR100 3.7 14.7 1.0
CB A:HIS96 3.7 13.3 1.0
ND1 A:HIS96 3.9 16.7 1.0
CD1 A:TYR100 3.9 13.2 1.0
CA A:HIS96 4.0 12.8 1.0
CG A:LEU54 4.0 14.8 1.0
C13 A:NUT201 4.0 12.9 1.0
CD2 A:HIS96 4.1 14.0 1.0
C17 A:NUT201 4.1 15.0 1.0
O A:HIS96 4.1 12.0 1.0
CG2 A:ILE99 4.3 11.8 1.0
CE1 A:HIS96 4.4 17.5 1.0
CB A:ILE99 4.4 10.2 1.0
NE2 A:HIS96 4.5 15.4 1.0
C A:HIS96 4.5 11.1 1.0
C12 A:NUT201 4.6 13.3 1.0
CD1 A:ILE99 4.7 14.0 1.0
O A:HOH391 4.8 27.2 1.0
CD2 A:LEU54 4.8 15.9 1.0
O A:HOH396 4.9 41.2 1.0

Reference:

B.Anil, C.Riedinger, J.A.Endicott, M.E.Noble. The Structure of An MDM2-Nutlin-3A Complex Solved By the Use of A Validated MDM2 Surface-Entropy Reduction Mutant. Acta Crystallogr.,Sect.D V. 69 1358 2013.
ISSN: ISSN 0907-4449
PubMed: 23897459
DOI: 10.1107/S0907444913004459
Page generated: Sun Jul 21 15:48:39 2024

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