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Chlorine in PDB 4hsf: Lysozyme with Arginine at 318K

Enzymatic activity of Lysozyme with Arginine at 318K

All present enzymatic activity of Lysozyme with Arginine at 318K:
3.2.1.17;

Protein crystallography data

The structure of Lysozyme with Arginine at 318K, PDB code: 4hsf was solved by P.Sharma, F.Ashish, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.81 / 1.82
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.353, 78.353, 37.063, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 22.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lysozyme with Arginine at 318K (pdb code 4hsf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Lysozyme with Arginine at 318K, PDB code: 4hsf:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 4hsf

Go back to Chlorine Binding Sites List in 4hsf
Chlorine binding site 1 out of 4 in the Lysozyme with Arginine at 318K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lysozyme with Arginine at 318K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:25.7
occ:1.00
OH A:TYR23 3.0 19.6 1.0
O A:HOH308 3.5 23.9 1.0
CZ A:TYR23 3.7 20.1 1.0
CE2 A:TYR23 3.7 17.7 1.0
CA A:GLY104 4.2 18.9 1.0
O A:ARG21 4.6 21.9 1.0
N A:GLY104 4.8 21.7 1.0
CE1 A:TYR23 4.8 18.0 1.0
O A:HOH358 4.8 33.1 1.0
CD2 A:TYR23 4.9 19.4 1.0
O A:HOH385 5.0 41.3 1.0

Chlorine binding site 2 out of 4 in 4hsf

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Chlorine binding site 2 out of 4 in the Lysozyme with Arginine at 318K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Lysozyme with Arginine at 318K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl203

b:34.5
occ:1.00
CE2 A:PHE38 3.7 26.5 1.0
NZ A:LYS33 3.7 28.3 1.0
CZ3 A:TRP123 4.0 24.2 1.0
CE A:LYS33 4.1 27.8 1.0
CB A:ARG5 4.2 23.2 1.0
CD A:ARG5 4.3 25.5 1.0
CD A:LYS33 4.4 22.0 1.0
CZ A:PHE38 4.4 20.4 1.0
CD2 A:PHE38 4.6 22.0 1.0
CG A:ARG5 4.7 23.5 1.0
CH2 A:TRP123 4.8 23.8 1.0
CE3 A:TRP123 4.8 26.2 1.0
NE A:ARG5 4.9 28.6 1.0

Chlorine binding site 3 out of 4 in 4hsf

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Chlorine binding site 3 out of 4 in the Lysozyme with Arginine at 318K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Lysozyme with Arginine at 318K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:26.8
occ:1.00
O A:HOH310 3.0 18.3 1.0
N A:THR69 3.2 20.2 1.0
O A:THR69 3.3 23.0 1.0
N A:ARG68 3.5 19.9 1.0
C A:GLY67 3.6 22.5 1.0
OG A:SER72 3.6 28.2 1.0
CA A:GLY67 3.7 20.2 1.0
N A:GLY67 3.7 20.0 1.0
C A:THR69 3.7 22.6 1.0
OD1 A:ASN65 3.7 21.5 1.0
CA A:THR69 3.9 21.4 1.0
O A:HOH321 4.0 21.7 1.0
C A:ARG68 4.2 24.0 1.0
CB A:THR69 4.2 23.0 1.0
O A:GLY67 4.2 23.8 1.0
CA A:ARG68 4.3 21.2 1.0
OD1 A:ASP66 4.3 20.6 1.0
N A:PRO70 4.6 24.8 1.0
O A:HOH302 4.7 16.5 1.0
OG1 A:THR69 4.8 22.1 1.0
C A:ASP66 4.8 18.9 1.0
O A:HOH316 4.8 24.0 0.5
N A:ASP66 4.9 18.6 1.0
CG A:ASN65 4.9 22.4 1.0
CB A:SER72 5.0 23.5 1.0

Chlorine binding site 4 out of 4 in 4hsf

Go back to Chlorine Binding Sites List in 4hsf
Chlorine binding site 4 out of 4 in the Lysozyme with Arginine at 318K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Lysozyme with Arginine at 318K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:33.3
occ:1.00
ND2 A:ASN65 3.2 26.4 1.0
O A:HOH339 3.2 25.0 1.0
CB A:PRO79 3.7 19.1 1.0
CA A:PRO79 3.7 20.6 1.0
CB A:ASN65 3.9 18.9 1.0
N A:PRO79 4.0 19.8 1.0
CG A:ASN65 4.0 22.4 1.0
CD A:PRO79 4.3 22.8 1.0
O A:ASN65 4.4 17.7 1.0
CG A:PRO79 4.4 22.3 1.0
C A:ILE78 4.6 21.3 1.0
O A:ILE78 4.8 20.7 1.0
C A:ASN65 4.9 17.0 1.0
ND2 A:ASN74 5.0 24.3 1.0
CA A:ASN65 5.0 20.0 1.0

Reference:

P.Sharma, F.Ashish. Lysozyme with Arginine at 318K. To Be Published.
Page generated: Sat Dec 12 10:43:29 2020

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