Atomistry » Chlorine » PDB 4ibe-4iii » 4ih0
Atomistry »
  Chlorine »
    PDB 4ibe-4iii »
      4ih0 »

Chlorine in PDB 4ih0: Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin

Protein crystallography data

The structure of Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin, PDB code: 4ih0 was solved by M.Chruszcz, M.A.Ciardiello, I.Giangrieco, T.Osinski, W.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.75
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 70.808, 70.808, 114.024, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 21.6

Other elements in 4ih0:

The structure of Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin (pdb code 4ih0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin, PDB code: 4ih0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ih0

Go back to Chlorine Binding Sites List in 4ih0
Chlorine binding site 1 out of 2 in the Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl205

b:28.5
occ:0.50
N A:VAL52 3.3 16.5 1.0
CA A:THR51 3.8 18.5 1.0
CB A:THR51 3.9 21.2 1.0
CB A:VAL52 4.0 17.7 1.0
C A:THR51 4.0 17.0 1.0
CG2 A:VAL52 4.2 18.6 1.0
CA A:VAL52 4.2 15.8 1.0
CG2 A:THR51 4.4 22.9 1.0
O A:GLY50 4.7 19.9 1.0
CD1 A:ILE76 4.9 17.7 1.0
O A:VAL52 4.9 17.4 1.0

Chlorine binding site 2 out of 2 in 4ih0

Go back to Chlorine Binding Sites List in 4ih0
Chlorine binding site 2 out of 2 in the Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Kirola (Act D 11) From Crystal Soaked with Serotonin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl207

b:23.7
occ:1.00
O A:HOH397 2.9 40.0 1.0
OG1 A:THR84 3.0 16.4 1.0
OG A:SER82 3.1 19.5 1.0
C A:SER82 3.6 13.0 1.0
O A:SER82 3.7 12.8 1.0
CB A:SER82 3.7 17.6 1.0
O A:ALA75 3.7 12.4 1.0
N A:THR84 3.7 11.8 1.0
N A:VAL83 3.8 12.5 0.5
N A:VAL83 3.8 12.5 0.5
C A:VAL83 3.8 12.2 0.5
CA A:VAL83 3.8 12.3 0.5
C A:ALA75 3.8 13.3 1.0
CB A:ALA75 3.9 14.1 1.0
CA A:VAL83 3.9 12.2 0.5
C A:VAL83 3.9 12.1 0.5
N A:ASP77 3.9 14.6 1.0
CB A:THR84 4.0 13.4 1.0
O A:HOH323 4.0 27.3 1.0
N A:ILE76 4.1 13.4 1.0
CA A:ILE76 4.1 14.3 1.0
C A:ILE76 4.2 14.7 1.0
MG A:MG208 4.3 43.1 0.5
CA A:SER82 4.3 14.7 1.0
O A:VAL83 4.3 11.7 0.5
O A:HOH396 4.4 24.7 0.5
CB A:ASP77 4.4 18.5 1.0
CA A:THR84 4.4 12.3 1.0
CA A:ALA75 4.5 13.0 1.0
O A:VAL83 4.7 11.5 0.5
O A:HOH339 4.7 27.3 1.0
CA A:ASP77 4.8 16.7 1.0
CG2 A:ILE102 4.8 16.2 1.0
O A:ILE76 4.9 14.3 1.0
O A:HOH332 5.0 29.5 1.0

Reference:

M.Chruszcz, M.A.Ciardiello, T.Osinski, K.A.Majorek, I.Giangrieco, J.Font, H.Breiteneder, K.Thalassinos, W.Minor. Structural and Bioinformatic Analysis of the Kiwifruit Allergen Act D 11, A Member of the Family of Ripening-Related Proteins. Mol.Immunol. V. 56 794 2013.
ISSN: ISSN 0161-5890
PubMed: 23969108
DOI: 10.1016/J.MOLIMM.2013.07.004
Page generated: Sat Dec 12 10:45:35 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy