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Chlorine in PDB 4iiw: 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes

Protein crystallography data

The structure of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes, PDB code: 4iiw was solved by G.Minasov, A.Halavaty, L.Shuvalova, I.Dubrovska, J.Winsor, S.Grimshaw, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.91 / 2.60
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 126.899, 126.899, 115.584, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 21.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes (pdb code 4iiw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes, PDB code: 4iiw:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in 4iiw

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Chlorine binding site 1 out of 6 in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:43.5
occ:0.50
ND2 A:ASN70 2.8 60.0 1.0
ND2 A:ASN71 3.6 37.0 1.0
O A:HOH580 4.0 51.1 1.0
CG A:ASN70 4.1 53.2 1.0
CB A:ASN71 4.1 39.5 1.0
O A:ASN70 4.3 42.5 1.0
CG A:ASN71 4.4 41.3 1.0
OD1 A:ASN70 4.7 54.8 1.0
C A:ASN70 4.8 41.6 1.0
CA A:ASN71 4.9 37.4 1.0

Chlorine binding site 2 out of 6 in 4iiw

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Chlorine binding site 2 out of 6 in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:89.8
occ:0.25
O A:HOH625 3.5 38.4 0.5
O A:HOH625 3.6 23.4 0.5
CL A:CL403 4.0 77.1 0.2
CE2 A:TYR81 4.6 36.4 1.0
OH A:TYR81 4.7 38.6 1.0

Chlorine binding site 3 out of 6 in 4iiw

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Chlorine binding site 3 out of 6 in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:77.1
occ:0.25
CL A:CL402 4.0 89.8 0.2
CZ A:TYR81 4.3 33.1 1.0
OH A:TYR81 4.3 38.6 1.0
CE2 A:TYR81 4.5 36.4 1.0
CE1 A:TYR81 4.6 32.8 1.0
CE2 A:PHE77 4.7 36.6 1.0

Chlorine binding site 4 out of 6 in 4iiw

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Chlorine binding site 4 out of 6 in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl401

b:42.0
occ:0.50
ND2 B:ASN70 2.8 61.3 1.0
ND2 B:ASN71 3.5 40.1 1.0
CG B:ASN70 4.1 56.0 1.0
CB B:ASN71 4.2 42.0 1.0
CG B:ASN71 4.3 42.7 1.0
O B:ASN70 4.4 46.2 1.0
OD1 B:ASN70 4.7 57.4 1.0
C B:ASN70 4.8 43.8 1.0
CA B:ASN71 4.9 39.4 1.0

Chlorine binding site 5 out of 6 in 4iiw

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Chlorine binding site 5 out of 6 in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl402

b:77.9
occ:0.25
CL B:CL403 3.8 83.5 0.2
O B:HOH534 3.8 66.4 1.0
CE2 B:TYR81 4.6 41.2 1.0
OH B:TYR81 5.0 48.0 1.0

Chlorine binding site 6 out of 6 in 4iiw

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Chlorine binding site 6 out of 6 in the 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl403

b:83.5
occ:0.25
CL B:CL402 3.8 77.9 0.2
CZ B:TYR81 4.2 42.3 1.0
OH B:TYR81 4.3 48.0 1.0
CE2 B:TYR81 4.3 41.2 1.0
CE1 B:TYR81 4.7 37.5 1.0
CD2 B:TYR81 4.9 37.8 1.0
CE2 B:PHE77 4.9 41.5 1.0

Reference:

G.Minasov, A.Halavaty, L.Shuvalova, I.Dubrovska, J.Winsor, S.Grimshaw, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 2.6 Angstrom Crystal Structure of Putative Yceg-Like Protein LMO1499 From Listeria Monocytogenes To Be Published.
Page generated: Sun Jul 21 16:43:51 2024

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