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Chlorine in PDB 4j19: Structure of A Novel Telomere Repeat Binding Protein Bound to Dna

Protein crystallography data

The structure of Structure of A Novel Telomere Repeat Binding Protein Bound to Dna, PDB code: 4j19 was solved by D.Kappei, F.Butter, C.Benda, M.Scheibe, I.Draskovic, M.Stevense, C.Lopesnovo, C.Basquin, D.B.Krastev, R.Kittler, R.Jessberger, A.J.Londono-Vallejo, M.Mann, F.Buchholz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.16 / 2.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 111.433, 116.490, 75.670, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 22.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of A Novel Telomere Repeat Binding Protein Bound to Dna (pdb code 4j19). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of A Novel Telomere Repeat Binding Protein Bound to Dna, PDB code: 4j19:

Chlorine binding site 1 out of 1 in 4j19

Go back to Chlorine Binding Sites List in 4j19
Chlorine binding site 1 out of 1 in the Structure of A Novel Telomere Repeat Binding Protein Bound to Dna


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of A Novel Telomere Repeat Binding Protein Bound to Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl101

b:89.0
occ:1.00
O A:HOH416 2.4 0.6 1.0
O D:HOH112 2.5 57.0 1.0
NZ A:LYS335 2.8 63.4 1.0
O6 C:DG13 3.3 61.9 1.0
N7 C:DG13 3.4 64.3 1.0
CE A:LYS335 3.8 65.2 1.0
N4 D:DC7 3.9 55.4 1.0
C6 C:DG13 4.0 64.6 1.0
C5 C:DG13 4.0 60.9 1.0
O6 C:DG14 4.0 66.4 1.0
CB A:ALA331 4.3 53.9 1.0
C8 C:DG13 4.5 69.2 1.0
N7 C:DA12 4.6 59.3 1.0
C8 C:DA12 4.6 53.9 1.0
O D:HOH107 4.7 56.5 1.0
C5 C:DA12 4.7 56.3 1.0
N9 C:DA12 4.8 58.3 1.0
OH A:TYR327 4.8 74.6 1.0
C4 C:DA12 4.9 62.3 1.0

Reference:

D.Kappei, F.Butter, C.Benda, M.Scheibe, I.Draskovic, M.Stevense, C.L.Novo, C.Basquin, M.Araki, K.Araki, D.B.Krastev, R.Kittler, R.Jessberger, J.A.Londono-Vallejo, M.Mann, F.Buchholz. HOT1 Is A Mammalian Direct Telomere Repeat-Binding Protein Contributing to Telomerase Recruitment. Embo J. V. 32 1681 2013.
ISSN: ISSN 0261-4189
PubMed: 23685356
DOI: 10.1038/EMBOJ.2013.105
Page generated: Sun Jul 21 17:10:48 2024

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