Chlorine in PDB 4jle: Structure of A P. Falciparum Protein
Protein crystallography data
The structure of Structure of A P. Falciparum Protein, PDB code: 4jle
was solved by
L.Slater,
I.Vakonakis,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
56.71 /
2.35
|
Space group
|
P 31 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
71.030,
71.030,
146.400,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
20.7 /
25.5
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of A P. Falciparum Protein
(pdb code 4jle). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the
Structure of A P. Falciparum Protein, PDB code: 4jle:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
Chlorine binding site 1 out
of 6 in 4jle
Go back to
Chlorine Binding Sites List in 4jle
Chlorine binding site 1 out
of 6 in the Structure of A P. Falciparum Protein
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of A P. Falciparum Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl201
b:94.0
occ:1.00
|
CG
|
A:GLU99
|
3.7
|
50.9
|
1.0
|
NE1
|
B:TRP131
|
4.1
|
45.2
|
1.0
|
CB
|
A:LEU102
|
4.3
|
46.4
|
1.0
|
CG1
|
B:VAL127
|
4.3
|
55.1
|
1.0
|
O
|
A:GLU99
|
4.3
|
47.7
|
1.0
|
CG
|
A:LEU103
|
4.4
|
52.7
|
1.0
|
CD2
|
A:LEU103
|
4.6
|
53.2
|
1.0
|
OE2
|
A:GLU99
|
4.6
|
74.2
|
1.0
|
CD
|
A:GLU99
|
4.6
|
72.3
|
1.0
|
CA
|
A:GLU99
|
4.7
|
43.1
|
1.0
|
CB
|
A:GLU99
|
4.8
|
43.9
|
1.0
|
N
|
A:LEU103
|
4.8
|
49.4
|
1.0
|
CE2
|
B:TRP131
|
4.9
|
47.3
|
1.0
|
CZ2
|
B:TRP131
|
4.9
|
46.7
|
1.0
|
C
|
A:LEU102
|
4.9
|
52.4
|
1.0
|
CD1
|
A:LEU102
|
5.0
|
48.7
|
1.0
|
|
Chlorine binding site 2 out
of 6 in 4jle
Go back to
Chlorine Binding Sites List in 4jle
Chlorine binding site 2 out
of 6 in the Structure of A P. Falciparum Protein
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of A P. Falciparum Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl202
b:55.6
occ:1.00
|
CE2
|
A:PHE89
|
3.8
|
52.7
|
1.0
|
O
|
A:HOH306
|
3.9
|
44.9
|
1.0
|
CZ
|
A:PHE89
|
3.9
|
51.5
|
1.0
|
CE
|
A:LYS85
|
4.3
|
74.2
|
1.0
|
CD2
|
A:HIS88
|
4.7
|
37.5
|
1.0
|
CD
|
A:LYS85
|
4.9
|
63.8
|
1.0
|
CG
|
A:LYS85
|
4.9
|
55.5
|
1.0
|
NZ
|
A:LYS85
|
5.0
|
80.7
|
1.0
|
|
Chlorine binding site 3 out
of 6 in 4jle
Go back to
Chlorine Binding Sites List in 4jle
Chlorine binding site 3 out
of 6 in the Structure of A P. Falciparum Protein
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of A P. Falciparum Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:0.4
occ:1.00
|
CA
|
A:PHE107
|
4.0
|
66.3
|
1.0
|
N
|
A:PHE107
|
4.1
|
64.8
|
1.0
|
CB
|
A:PHE107
|
4.2
|
68.6
|
1.0
|
CB
|
B:PHE107
|
4.2
|
61.3
|
1.0
|
CG
|
B:PHE107
|
4.2
|
65.3
|
1.0
|
CD2
|
B:PHE107
|
4.4
|
69.5
|
1.0
|
O
|
A:LEU103
|
4.4
|
54.6
|
1.0
|
C
|
A:ALA106
|
4.5
|
65.8
|
1.0
|
CD2
|
A:PHE107
|
4.6
|
74.1
|
1.0
|
CB
|
A:ALA106
|
4.7
|
61.6
|
1.0
|
O
|
B:LEU103
|
4.7
|
55.3
|
1.0
|
CD1
|
B:PHE107
|
4.7
|
69.3
|
1.0
|
O
|
A:ALA106
|
4.8
|
65.1
|
1.0
|
CG
|
A:PHE107
|
4.9
|
71.2
|
1.0
|
C
|
B:LEU103
|
5.0
|
55.9
|
1.0
|
|
Chlorine binding site 4 out
of 6 in 4jle
Go back to
Chlorine Binding Sites List in 4jle
Chlorine binding site 4 out
of 6 in the Structure of A P. Falciparum Protein
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Structure of A P. Falciparum Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl204
b:73.1
occ:1.00
|
NE1
|
A:TRP131
|
3.5
|
46.8
|
1.0
|
CG
|
B:GLU99
|
3.5
|
67.4
|
1.0
|
CE1
|
B:HIS48
|
4.0
|
70.0
|
1.0
|
ND1
|
B:HIS48
|
4.0
|
69.4
|
1.0
|
CB
|
B:LEU102
|
4.0
|
48.7
|
1.0
|
CZ2
|
A:TRP131
|
4.1
|
46.6
|
1.0
|
CE2
|
A:TRP131
|
4.1
|
47.8
|
1.0
|
CG1
|
A:VAL127
|
4.4
|
43.0
|
1.0
|
CA
|
B:GLU99
|
4.4
|
55.0
|
1.0
|
CD1
|
B:LEU102
|
4.4
|
50.7
|
1.0
|
O
|
B:GLU99
|
4.4
|
62.1
|
1.0
|
CB
|
B:GLU99
|
4.4
|
56.1
|
1.0
|
CD
|
B:GLU99
|
4.5
|
78.7
|
1.0
|
OE2
|
B:GLU99
|
4.6
|
76.3
|
1.0
|
CD1
|
A:TRP131
|
4.6
|
47.3
|
1.0
|
CG
|
B:LEU102
|
4.9
|
51.2
|
1.0
|
C
|
B:GLU99
|
4.9
|
61.1
|
1.0
|
CG
|
B:LEU103
|
4.9
|
50.9
|
1.0
|
C
|
B:LEU102
|
5.0
|
54.7
|
1.0
|
N
|
B:LEU103
|
5.0
|
50.0
|
1.0
|
|
Chlorine binding site 5 out
of 6 in 4jle
Go back to
Chlorine Binding Sites List in 4jle
Chlorine binding site 5 out
of 6 in the Structure of A P. Falciparum Protein
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Structure of A P. Falciparum Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl205
b:90.2
occ:1.00
|
NE2
|
A:HIS153
|
3.3
|
62.2
|
1.0
|
CB
|
B:TYR79
|
3.6
|
61.2
|
1.0
|
CG
|
B:PRO76
|
3.7
|
80.2
|
1.0
|
CD
|
B:PRO76
|
3.7
|
75.6
|
1.0
|
CE1
|
A:HIS153
|
4.0
|
61.5
|
1.0
|
CB
|
B:PRO76
|
4.3
|
75.2
|
1.0
|
CG
|
B:TYR79
|
4.3
|
59.8
|
1.0
|
CD2
|
A:HIS153
|
4.5
|
62.4
|
1.0
|
CD1
|
B:TYR79
|
4.5
|
60.6
|
1.0
|
CD1
|
A:LEU157
|
4.7
|
64.1
|
1.0
|
CA
|
B:TYR79
|
4.8
|
62.0
|
1.0
|
N
|
B:TYR79
|
4.8
|
64.2
|
1.0
|
N
|
B:PRO76
|
4.9
|
74.1
|
1.0
|
CD2
|
A:LEU157
|
5.0
|
64.7
|
1.0
|
|
Chlorine binding site 6 out
of 6 in 4jle
Go back to
Chlorine Binding Sites List in 4jle
Chlorine binding site 6 out
of 6 in the Structure of A P. Falciparum Protein
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Structure of A P. Falciparum Protein within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl202
b:90.7
occ:1.00
|
O
|
B:LEU114
|
3.5
|
73.0
|
1.0
|
CB
|
B:ASN111
|
3.6
|
50.4
|
1.0
|
CB
|
B:CYS115
|
3.8
|
72.8
|
1.0
|
O
|
A:LEU110
|
3.9
|
64.7
|
1.0
|
CG
|
B:ASN111
|
4.0
|
69.2
|
1.0
|
OD1
|
B:ASN111
|
4.1
|
62.0
|
1.0
|
CZ
|
B:PHE107
|
4.2
|
72.7
|
1.0
|
O
|
B:GLY112
|
4.2
|
56.2
|
1.0
|
C
|
B:LEU114
|
4.3
|
73.2
|
1.0
|
CA
|
B:CYS115
|
4.3
|
72.4
|
1.0
|
CE1
|
B:PHE107
|
4.4
|
71.5
|
1.0
|
SG
|
B:CYS115
|
4.6
|
77.5
|
1.0
|
N
|
B:CYS115
|
4.6
|
71.8
|
1.0
|
N
|
B:GLY112
|
4.7
|
57.6
|
1.0
|
ND2
|
B:ASN111
|
4.7
|
63.1
|
1.0
|
CA
|
B:ASN111
|
4.9
|
55.2
|
1.0
|
C
|
A:LEU110
|
5.0
|
63.7
|
1.0
|
|
Reference:
L.Slater,
M.Erat,
I.Vakonakis.
Structure of A P. Falciparum Phist Domain To Be Published.
Page generated: Sun Jul 21 17:33:51 2024
|