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Chlorine in PDB 4jn8: Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site

Protein crystallography data

The structure of Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site, PDB code: 4jn8 was solved by M.W.Vetting, F.Groninger-Poe, J.T.Bouvier, D.Wichelecki, L.L.Morisco, S.R.Wasserman, S.Sojitra, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, M.Stead, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.19 / 1.40
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 124.044, 124.044, 114.640, 90.00, 90.00, 90.00
R / Rfree (%) 12.9 / 14.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site (pdb code 4jn8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site, PDB code: 4jn8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4jn8

Go back to Chlorine Binding Sites List in 4jn8
Chlorine binding site 1 out of 2 in the Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl409

b:21.9
occ:0.78
HD22 A:ASN140 2.1 8.9 1.0
HH22 A:ARG181 2.2 12.7 1.0
ND2 A:ASN140 3.0 7.2 1.0
NH2 A:ARG181 3.0 10.3 1.0
O A:HOH693 3.0 17.7 1.0
HH12 A:ARG181 3.1 13.6 1.0
HD21 A:ASN140 3.5 8.9 1.0
HG21 A:THR146 3.5 8.0 1.0
HH21 A:ARG181 3.5 12.7 1.0
HG22 A:THR146 3.6 8.0 1.0
HG23 A:THR146 3.6 8.0 1.0
O A:HOH791 3.7 25.1 1.0
CG2 A:THR146 3.8 6.5 1.0
NH1 A:ARG181 3.8 11.1 1.0
O A:HOH821 3.8 28.2 1.0
CZ A:ARG181 3.9 8.7 1.0
CG A:ASN140 3.9 6.8 1.0
OD1 A:ASN140 3.9 8.0 1.0
HA2 A:GLY144 4.6 6.7 1.0
HH11 A:ARG181 4.6 13.6 1.0
O A:GLY144 4.8 5.0 1.0
HE1 A:TYR184 4.8 8.7 1.0

Chlorine binding site 2 out of 2 in 4jn8

Go back to Chlorine Binding Sites List in 4jn8
Chlorine binding site 2 out of 2 in the Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl410

b:14.8
occ:0.68
HE1 A:TRP143 2.3 10.4 1.0
O A:HOH889 2.3 28.4 1.0
HH12 A:ARG138 2.3 14.5 1.0
HD13 A:LEU320 2.9 13.7 1.0
NE1 A:TRP143 3.1 8.4 1.0
NH1 A:ARG138 3.1 11.8 1.0
O A:HOH730 3.2 24.0 1.0
HZ2 A:TRP143 3.2 8.7 1.0
O A:HOH668 3.3 14.6 1.0
O A:HOH801 3.3 24.3 1.0
HH11 A:ARG138 3.4 14.5 1.0
CD1 A:LEU320 3.8 11.2 1.0
HG3 A:GLU142 3.8 9.9 1.0
HD11 A:LEU320 3.8 13.7 1.0
CE2 A:TRP143 3.8 6.0 1.0
CZ2 A:TRP143 3.8 7.0 1.0
HH22 A:ARG138 3.8 12.8 1.0
O A:HOH954 3.8 36.0 1.0
CZ A:ARG138 4.2 9.7 1.0
HD12 A:LEU320 4.2 13.7 1.0
CD1 A:TRP143 4.3 9.1 1.0
NH2 A:ARG138 4.4 10.4 1.0
HD22 A:LEU320 4.4 11.4 1.0
HD23 A:LEU139 4.4 8.0 1.0
HB3 A:GLU142 4.5 7.8 1.0
HD1 A:TRP143 4.5 11.2 1.0
HB2 A:GLU142 4.6 7.8 1.0
O A:LYS322 4.6 13.9 1.0
CG A:GLU142 4.6 8.0 1.0
CB A:GLU142 4.8 6.3 1.0
O A:HOH1049 4.9 37.6 1.0
CG A:LEU320 4.9 8.5 1.0
CD2 A:LEU320 4.9 9.3 1.0
HD21 A:LEU320 5.0 11.4 1.0

Reference:

M.W.Vetting, F.Groninger-Poe, J.T.Bouvier, D.Wichelecki, L.L.Morisco, S.R.Wasserman, S.Sojitra, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, M.Stead, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of An Enolase (Putative Galactarate Dehydratase, Target Efi-500740) From Agrobacterium Radiobacter, Bound Sulfate, No Metal Ion, Ordered Active Site To Be Published.
Page generated: Sat Dec 12 10:48:29 2020

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