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Chlorine in PDB 4js3: Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057

Enzymatic activity of Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057

All present enzymatic activity of Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057:
1.3.5.2;

Protein crystallography data

The structure of Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057, PDB code: 4js3 was solved by L.Zhu, H.Li, J.Zhu, X.Ren, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.73 / 2.00
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 90.820, 90.820, 123.300, 90.00, 90.00, 120.00
R / Rfree (%) 15 / 17.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057 (pdb code 4js3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057, PDB code: 4js3:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4js3

Go back to Chlorine Binding Sites List in 4js3
Chlorine binding site 1 out of 2 in the Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:58.7
occ:0.39
CL1 A:JS3403 0.0 58.7 0.4
C22 A:JS3403 1.8 45.7 0.4
N23 A:JS3403 2.4 47.2 0.5
N23 A:JS3403 2.8 46.3 0.4
C24 A:JS3403 3.1 44.2 0.5
S21 A:JS3403 3.1 45.5 0.4
C26 A:JS3403 3.2 42.7 0.5
C22 A:JS3403 3.5 44.3 0.5
C24 A:JS3403 4.0 43.2 0.4
CL1 A:JS3403 4.1 60.6 0.5
C20 A:JS3403 4.3 40.5 0.4
C20 A:JS3403 4.5 40.8 0.5
O A:LEU68 4.7 42.5 1.0
C A:LEU67 4.9 31.9 1.0
N A:LEU68 4.9 28.7 1.0

Chlorine binding site 2 out of 2 in 4js3

Go back to Chlorine Binding Sites List in 4js3
Chlorine binding site 2 out of 2 in the Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:60.6
occ:0.45
CL1 A:JS3403 0.0 60.6 0.5
C22 A:JS3403 1.8 44.3 0.5
N23 A:JS3403 2.3 46.3 0.4
N23 A:JS3403 2.8 47.2 0.5
C24 A:JS3403 3.0 43.2 0.4
C26 A:JS3403 3.0 42.4 0.4
S21 A:JS3403 3.1 41.9 0.5
C22 A:JS3403 3.5 45.7 0.4
C24 A:JS3403 4.0 44.2 0.5
CL1 A:JS3403 4.1 58.7 0.4
C20 A:JS3403 4.3 40.8 0.5
CD1 A:LEU67 4.4 32.3 1.0
C20 A:JS3403 4.4 40.5 0.4
CB A:LEU67 4.8 29.5 1.0
S21 A:JS3403 4.9 45.5 0.4
CG A:LEU67 5.0 31.9 1.0

Reference:

L.Zhu, H.Li, J.Zhu, X.Ren. Crystal Structure of Human Dihydroorotate Dehydrogenase (Dhodh) with 057 To Be Published.
Page generated: Sun Jul 21 17:40:52 2024

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