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Chlorine in PDB 4k2f: Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488

Enzymatic activity of Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488

All present enzymatic activity of Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488:
3.5.1.97;

Protein crystallography data

The structure of Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488, PDB code: 4k2f was solved by E.J.Drake, J.M.Wurst, J.R.Theriault, B.Munoz, A.M.Gulick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.69 / 1.99
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 120.280, 166.020, 94.190, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 20.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488 (pdb code 4k2f). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488, PDB code: 4k2f:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4k2f

Go back to Chlorine Binding Sites List in 4k2f
Chlorine binding site 1 out of 2 in the Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl805

b:19.8
occ:1.00
CL1 B:A08805 0.0 19.8 1.0
C1 B:A08805 1.8 17.7 1.0
C6 B:A08805 2.7 18.4 1.0
C2 B:A08805 2.8 17.8 1.0
CG2 B:VAL374 3.6 14.8 1.0
CG2 A:THR166 3.7 11.4 1.0
CD1 B:LEU269 3.8 19.1 1.0
C5 B:A08805 4.0 16.7 1.0
O A:THR166 4.0 13.8 1.0
CG1 B:VAL374 4.1 11.1 1.0
C3 B:A08805 4.1 17.8 1.0
CB A:LEU169 4.1 11.6 1.0
CD2 B:LEU375 4.2 14.3 1.0
CA A:THR166 4.2 12.1 1.0
CD1 A:LEU169 4.3 16.5 1.0
CD2 B:LEU269 4.4 20.8 1.0
CB A:THR166 4.4 13.3 1.0
C4 B:A08805 4.5 18.0 1.0
CB B:VAL374 4.5 13.9 1.0
OG1 A:THR166 4.6 13.5 1.0
C A:THR166 4.6 14.2 1.0
CG B:LEU269 4.8 17.7 1.0
CG A:LEU169 4.9 15.6 1.0
CG A:LEU170 5.0 14.1 1.0

Chlorine binding site 2 out of 2 in 4k2f

Go back to Chlorine Binding Sites List in 4k2f
Chlorine binding site 2 out of 2 in the Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Pseudomonas Aeruginosa Pvdq Bound to Brd-A08522488 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl805

b:27.8
occ:0.50
CL2 B:A08805 0.0 27.8 0.5
C12 B:A08805 1.7 30.2 1.0
C11 B:A08805 2.5 28.1 1.0
N14 B:A08805 2.6 27.7 1.0
CD2 B:HIS284 3.7 14.6 1.0
CB B:HIS284 3.7 12.3 1.0
C8 B:A08805 3.7 25.2 1.0
C10 B:A08805 3.7 34.2 1.0
CG B:HIS284 3.9 14.0 1.0
CG1 B:ILE274 4.0 12.1 1.0
CD1 B:ILE274 4.0 16.0 1.0
C9 B:A08805 4.2 33.4 1.0
CB B:ASN273 4.4 19.2 1.0
CZ B:PHE248 4.4 18.2 1.0
CZ2 B:TRP378 4.5 19.9 1.0
CE2 B:PHE248 4.7 21.5 1.0
O B:ASN273 4.7 17.2 1.0
NE2 B:HIS284 4.8 16.9 1.0
CG1 B:VAL403 4.8 13.8 1.0
CG2 B:VAL403 4.9 13.2 1.0
CZ B:PHE240 4.9 19.8 1.0
C B:ASN273 4.9 14.6 1.0
CE1 B:PHE240 4.9 18.3 1.0
CH2 B:TRP378 5.0 18.6 1.0

Reference:

J.M.Wurst, E.J.Drake, J.R.Theriault, I.T.Jewett, L.Verplank, J.R.Perez, S.Dandapani, M.Palmer, S.M.Moskowitz, S.L.Schreiber, B.Munoz, A.M.Gulick. Identification of Inhibitors of Pvdq, An Enzyme Involved in the Synthesis of the Siderophore Pyoverdine. Acs Chem.Biol. V. 9 1536 2014.
ISSN: ISSN 1554-8929
PubMed: 24824984
DOI: 10.1021/CB5001586
Page generated: Sun Jul 21 17:54:58 2024

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