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Chlorine in PDB 4kha: Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact

Protein crystallography data

The structure of Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact, PDB code: 4kha was solved by M.Hondele, F.Halbach, M.Hassler, A.G.Ladurner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.70 / 2.35
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 108.421, 108.421, 117.769, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact (pdb code 4kha). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact, PDB code: 4kha:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4kha

Go back to Chlorine Binding Sites List in 4kha
Chlorine binding site 1 out of 2 in the Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1201

b:38.9
occ:1.00
H A:ASN916 2.5 49.1 1.0
HD22 A:ASN916 2.6 57.0 1.0
HG A:SER1033 2.6 50.0 1.0
H A:ILE1036 2.7 38.8 1.0
HG22 A:ILE1036 3.0 47.4 1.0
HD11 A:ILE920 3.0 47.6 1.0
HB3 A:ALA1035 3.1 47.7 1.0
OG A:SER1033 3.1 41.6 1.0
HB A:ILE1036 3.2 65.9 1.0
HD22 A:LEU915 3.3 56.7 1.0
HA A:LEU915 3.3 39.3 1.0
HB3 A:LEU915 3.3 46.6 1.0
N A:ASN916 3.3 41.0 1.0
ND2 A:ASN916 3.3 47.5 1.0
HB2 A:ASN916 3.4 46.4 1.0
N A:ILE1036 3.5 32.3 1.0
H A:ALA1035 3.6 44.4 1.0
CG2 A:ILE1036 3.7 39.5 1.0
HB3 A:SER1033 3.8 38.5 1.0
HD21 A:ASN916 3.8 57.0 1.0
CB A:ILE1036 3.8 54.9 1.0
HG21 A:ILE1036 3.8 47.4 1.0
CA A:LEU915 3.9 32.7 1.0
CD1 A:ILE920 4.0 39.7 1.0
N A:ALA1035 4.0 37.0 1.0
CB A:ALA1035 4.0 39.7 1.0
CB A:LEU915 4.0 38.8 1.0
CB A:ASN916 4.0 38.6 1.0
CB A:SER1033 4.0 32.1 1.0
HG13 A:ILE920 4.1 47.6 1.0
CG A:ASN916 4.1 41.2 1.0
CD2 A:LEU915 4.1 47.3 1.0
C A:LEU915 4.1 43.5 1.0
CA A:ASN916 4.2 37.3 1.0
CA A:ILE1036 4.3 41.1 1.0
HD23 A:LEU915 4.3 56.7 1.0
HD12 A:ILE920 4.3 47.6 1.0
CA A:ALA1035 4.3 36.4 1.0
HD13 A:LEU915 4.4 43.2 1.0
HD22 A:LEU940 4.4 55.5 1.0
C A:ALA1035 4.4 37.5 1.0
HG12 A:ILE920 4.4 47.6 1.0
CG1 A:ILE920 4.4 39.7 1.0
HB2 A:ALA1035 4.4 47.7 1.0
O A:SER1033 4.5 40.6 1.0
HG23 A:ILE1036 4.5 47.4 1.0
HD13 A:ILE920 4.6 47.6 1.0
CG A:LEU915 4.6 39.1 1.0
C A:SER1033 4.6 43.9 1.0
HB1 A:ALA1035 4.6 47.7 1.0
HB2 A:SER1033 4.7 38.5 1.0
C A:TYR1034 4.7 39.7 1.0
HA A:ILE1036 4.7 49.3 1.0
O A:ASN916 4.8 39.3 1.0
HB2 A:LEU915 4.8 46.6 1.0
C A:ASN916 4.8 37.6 1.0
HB3 A:LEU940 4.9 61.0 1.0
HD21 A:LEU915 4.9 56.7 1.0
HB3 A:ASN916 4.9 46.4 1.0
CA A:SER1033 5.0 41.4 1.0

Chlorine binding site 2 out of 2 in 4kha

Go back to Chlorine Binding Sites List in 4kha
Chlorine binding site 2 out of 2 in the Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl201

b:46.8
occ:1.00
H B:GLY28 2.5 39.8 1.0
H B:SER18 2.9 43.7 1.0
HB B:THR16 3.1 64.6 1.0
HB2 B:ARG17 3.1 45.2 1.0
HB B:VAL27 3.2 48.1 1.0
H B:VAL27 3.2 45.0 1.0
O B:HOH310 3.2 41.5 1.0
O B:HOH307 3.3 39.6 1.0
N B:GLY28 3.3 33.1 1.0
H B:ARG17 3.3 48.7 1.0
OG B:SER18 3.4 36.8 1.0
N B:SER18 3.5 36.4 1.0
HB2 B:SER18 3.6 46.5 1.0
HG B:SER18 3.6 44.2 1.0
N B:VAL27 3.7 37.5 1.0
HA3 B:GLY28 3.7 37.1 1.0
N B:ARG17 3.9 40.5 1.0
CB B:SER18 3.9 38.8 1.0
CB B:ARG17 4.0 37.6 1.0
CB B:VAL27 4.0 40.0 1.0
HA B:PRO26 4.0 50.9 1.0
CB B:THR16 4.1 53.8 1.0
CA B:GLY28 4.1 30.9 1.0
CA B:VAL27 4.2 43.2 1.0
C B:VAL27 4.2 42.0 1.0
CA B:ARG17 4.3 42.0 1.0
CA B:SER18 4.3 39.5 1.0
C B:ARG17 4.3 47.0 1.0
C B:PRO26 4.4 37.9 1.0
HB3 B:ARG17 4.5 45.2 1.0
HG1 B:THR16 4.5 66.5 1.0
HA2 B:GLY28 4.6 37.1 1.0
OG1 B:THR16 4.6 55.4 1.0
HA B:SER18 4.6 47.4 1.0
HG23 B:VAL27 4.6 50.0 1.0
CA B:PRO26 4.7 42.5 1.0
H B:ARG29 4.7 41.6 1.0
C B:THR16 4.7 49.2 1.0
HG21 B:THR16 4.7 57.8 1.0
HG12 B:VAL27 4.8 42.8 1.0
HB3 B:SER18 4.8 46.5 1.0
HA B:THR16 4.8 59.4 1.0
CG2 B:THR16 4.8 48.1 1.0
HG22 B:THR16 4.8 57.8 1.0
HG3 B:ARG17 4.8 62.6 1.0
CA B:THR16 4.8 49.5 1.0
CG2 B:VAL27 4.9 41.6 1.0
HB2 B:PRO26 4.9 43.8 1.0
CG1 B:VAL27 5.0 35.7 1.0

Reference:

M.Hondele, T.Stuwe, M.Hassler, F.Halbach, A.Bowman, E.T.Zhang, B.Nijmeijer, C.Kotthoff, V.Rybin, S.Amlacher, E.Hurt, A.G.Ladurner. Structural Basis of Histone H2A-H2B Recognition By the Essential Chaperone Fact. Nature V. 499 111 2013.
ISSN: ISSN 0028-0836
PubMed: 23698368
DOI: 10.1038/NATURE12242
Page generated: Sun Jul 21 18:10:02 2024

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