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Chlorine in PDB 4kmm: M76H Variant of Human Ferrochelatase

Enzymatic activity of M76H Variant of Human Ferrochelatase

All present enzymatic activity of M76H Variant of Human Ferrochelatase:
4.99.1.1;

Protein crystallography data

The structure of M76H Variant of Human Ferrochelatase, PDB code: 4kmm was solved by W.N.Lanzilotta, A.E.Medlock, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 71.26 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 88.138, 93.418, 110.219, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 25.9

Other elements in 4kmm:

The structure of M76H Variant of Human Ferrochelatase also contains other interesting chemical elements:

Iron (Fe) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the M76H Variant of Human Ferrochelatase (pdb code 4kmm). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the M76H Variant of Human Ferrochelatase, PDB code: 4kmm:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4kmm

Go back to Chlorine Binding Sites List in 4kmm
Chlorine binding site 1 out of 2 in the M76H Variant of Human Ferrochelatase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of M76H Variant of Human Ferrochelatase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl505

b:37.0
occ:1.00
OG A:SER130 3.1 25.6 1.0
OH A:TYR123 3.2 34.6 1.0
CB A:HIS341 3.2 26.9 1.0
CB A:SER130 3.3 25.6 1.0
CD1 A:ILE132 3.4 23.3 1.0
N A:ILE342 3.5 26.1 1.0
CE2 A:TYR123 3.9 32.4 1.0
CA A:HIS341 3.9 26.6 1.0
CG1 A:ILE132 4.0 25.8 1.0
CZ A:TYR123 4.0 34.0 1.0
CA A:GLY78 4.0 29.3 1.0
CB A:ILE342 4.1 25.9 1.0
C A:HIS341 4.2 26.3 1.0
CG A:HIS341 4.3 32.6 1.0
CG2 A:ILE342 4.3 23.8 1.0
CA A:ILE342 4.4 26.5 1.0
CA A:SER130 4.4 24.9 1.0
ND1 A:HIS341 4.5 37.1 1.0
N A:GLY78 4.6 27.7 1.0
O A:GLY77 4.9 26.7 1.0
CE1 A:HIS76 4.9 30.3 0.5
C A:GLY78 5.0 29.6 1.0
C A:GLY77 5.0 27.0 1.0
CMD A:HEM501 5.0 58.6 0.5

Chlorine binding site 2 out of 2 in 4kmm

Go back to Chlorine Binding Sites List in 4kmm
Chlorine binding site 2 out of 2 in the M76H Variant of Human Ferrochelatase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of M76H Variant of Human Ferrochelatase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl505

b:49.1
occ:1.00
N B:ILE342 3.1 23.6 1.0
CB B:HIS341 3.2 24.1 1.0
OG B:SER130 3.3 28.9 1.0
OH B:TYR123 3.3 32.3 1.0
CD1 B:ILE132 3.4 25.0 1.0
CB B:SER130 3.5 28.4 1.0
CA B:HIS341 3.7 24.2 1.0
CE2 B:TYR123 3.8 30.2 1.0
CB B:ILE342 3.8 24.4 1.0
C B:HIS341 3.9 23.5 1.0
CG2 B:ILE342 4.0 22.5 1.0
CZ B:TYR123 4.0 32.1 1.0
CA B:ILE342 4.0 24.7 1.0
CG1 B:ILE132 4.1 24.7 1.0
CA B:GLY78 4.2 27.1 1.0
CG B:HIS341 4.2 29.4 1.0
CA B:SER130 4.4 28.3 1.0
ND1 B:HIS341 4.4 34.0 1.0
CMD B:HEM501 4.8 54.6 0.5
O B:GLY77 4.9 28.1 1.0

Reference:

W.N.Lanzilotta, A.E.Medlock. M76H Variant of Human Ferrochelatase To Be Published.
Page generated: Sat Dec 12 10:50:43 2020

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