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Chlorine in PDB 4kna: Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis

Enzymatic activity of Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis

All present enzymatic activity of Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis:
1.2.1.71;

Protein crystallography data

The structure of Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis, PDB code: 4kna was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.26 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 170.050, 120.690, 53.910, 90.00, 107.36, 90.00
R / Rfree (%) 15.2 / 19.2

Other elements in 4kna:

The structure of Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis (pdb code 4kna). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis, PDB code: 4kna:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4kna

Go back to Chlorine Binding Sites List in 4kna
Chlorine binding site 1 out of 2 in the Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:32.6
occ:1.00
O A:HOH996 2.9 36.9 1.0
NE A:ARG420 3.3 38.2 1.0
NH1 B:ARG134 3.6 25.4 1.0
CD B:ARG134 3.6 22.8 1.0
CE B:MET467 3.7 23.0 1.0
O A:ARG420 3.9 25.2 1.0
NH2 A:ARG420 3.9 39.2 1.0
O B:HOH1036 4.0 39.8 1.0
CA A:ARG421 4.0 27.0 1.0
CZ A:ARG420 4.1 37.8 1.0
CG A:ARG421 4.1 33.0 1.0
CD B:ARG132 4.1 21.7 1.0
CD A:ARG420 4.3 36.1 1.0
C A:ARG420 4.3 26.0 1.0
NE B:ARG134 4.4 25.2 1.0
CZ B:ARG134 4.4 27.1 1.0
O A:HOH836 4.4 37.0 1.0
N A:ARG421 4.4 24.8 1.0
CG A:ARG420 4.4 33.0 1.0
CB A:ARG421 4.6 28.8 1.0
CG B:ARG134 4.6 21.1 1.0
NE B:ARG132 4.7 22.5 1.0

Chlorine binding site 2 out of 2 in 4kna

Go back to Chlorine Binding Sites List in 4kna
Chlorine binding site 2 out of 2 in the Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl501

b:40.6
occ:1.00
NH1 B:ARG420 3.0 42.8 1.0
O B:ARG420 3.5 26.0 1.0
CE A:MET467 3.6 22.1 1.0
CD A:ARG134 3.6 25.1 1.0
CG B:ARG420 3.7 36.5 1.0
CG B:ARG421 3.8 29.1 1.0
CA B:ARG421 3.9 26.6 1.0
NH1 A:ARG134 3.9 30.1 1.0
CD A:ARG132 3.9 21.1 1.0
C B:ARG420 4.0 26.9 1.0
N B:ARG421 4.1 24.6 1.0
CD B:ARG420 4.2 37.7 1.0
CZ B:ARG420 4.2 43.0 1.0
O A:HOH831 4.2 32.3 1.0
NE A:ARG134 4.4 29.6 1.0
CB B:ARG421 4.5 27.1 1.0
CZ A:ARG134 4.6 33.8 1.0
NE A:ARG132 4.6 22.3 1.0
CG A:ARG134 4.6 23.5 1.0
NE B:ARG420 4.6 39.6 1.0
CB B:ARG420 4.6 29.8 1.0
O B:HOH996 4.8 52.9 1.0
C B:ARG421 4.9 25.2 1.0
CA B:ARG420 5.0 26.7 1.0

Reference:

T.E.Edwards, J.Abendroth, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of An N-Succinylglutamate 5-Semialdehyde Dehydrogenase From Burkholderia Thailandensis To Be Published.
Page generated: Sat Dec 12 10:50:52 2020

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