Chlorine in PDB 4kvo: The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa

All present enzymatic activity of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa:
2.3.1.88;

The structure of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa, PDB code: 4kvo was solved by G.P.Liszczak, R.Q.Marmorstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.05 / 3.15
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	80.739, 119.692, 132.024, 80.28, 76.85, 70.65
R / Rfree (%)	21.7 / 24.6

The structure of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa also contains other interesting chemical elements:

Sodium

(Na)

5 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 63;

Binding sites:

The binding sites of Chlorine atom in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa (pdb code 4kvo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 63 binding sites of Chlorine where determined in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa, PDB code: 4kvo:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl802 b:0.5 occ:1.00 NH1 A:ARG135 2.6 57.0 1.0 OG A:SER123 3.1 39.0 1.0 CE2 A:PHE538 3.4 47.2 1.0 CD1 A:LEU131 3.5 37.3 1.0 OH A:TYR546 3.6 40.0 1.0 CZ A:PHE538 3.6 46.7 1.0 CZ A:ARG135 3.8 57.7 1.0 CD A:ARG135 3.9 58.1 1.0 CB A:SER123 4.1 38.5 1.0 NE A:ARG135 4.3 58.6 1.0 CZ A:TYR546 4.3 39.4 1.0 CE2 A:TYR546 4.4 39.4 1.0 O A:HIS534 4.4 48.9 1.0 CD2 A:LEU131 4.5 41.5 1.0 CG A:LEU131 4.5 37.7 1.0 CD2 A:PHE538 4.6 47.2 1.0 O A:ALA151 4.6 54.9 1.0 NH2 A:ARG135 4.8 58.6 1.0 CE1 A:PHE538 4.9 46.1 1.0

Chlorine binding site 2 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl803 b:60.0 occ:1.00 CD1 A:PHE535 3.8 56.0 1.0 CE1 A:PHE535 4.1 58.6 1.0 O A:PHE535 4.2 51.9 1.0 OD1 A:ASN148 4.2 53.8 1.0 NH2 A:ARG135 4.3 58.6 1.0 CB A:PHE538 4.3 45.5 1.0 CB A:ALA147 4.3 46.5 1.0 CA A:PHE535 4.7 50.2 1.0 CG A:PHE535 4.8 53.5 1.0 C A:PHE535 4.9 50.5 1.0 CD2 A:PHE538 5.0 47.2 1.0

Chlorine binding site 3 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl804 b:62.7 occ:1.00 OG A:SER150 3.4 50.6 1.0 NE A:ARG146 3.6 48.3 1.0 CD2 A:PHE172 4.0 57.0 1.0 NH2 A:ARG146 4.0 50.6 1.0 OE1 A:GLU173 4.0 81.6 1.0 CB A:ALA190 4.0 56.5 1.0 CZ A:ARG146 4.2 50.3 1.0 CG A:ARG146 4.3 46.6 1.0 CE2 A:PHE172 4.3 57.3 1.0 CD A:ARG146 4.5 47.4 1.0 CB A:SER150 4.6 48.8 1.0 CG A:PHE172 4.6 58.4 1.0 CG1 A:VAL169 4.7 49.1 1.0 N A:SER150 4.7 50.7 1.0 CA A:SER150 4.7 50.3 1.0 O A:ARG146 4.9 44.9 1.0 CB A:TRP149 4.9 52.3 1.0 CB A:PHE172 5.0 60.3 1.0

Chlorine binding site 4 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl805 b:0.3 occ:1.00 NE A:ARG159 3.3 67.0 1.0 NH2 A:ARG159 3.3 75.1 1.0 CG A:LYS129 3.6 73.1 0.7 CZ A:ARG159 3.8 70.4 1.0 CG A:LYS129 4.3 72.0 0.3 CD A:ARG159 4.4 64.1 1.0 CB A:LYS129 4.4 71.4 0.3 CB A:LYS129 4.4 71.5 0.7 CB A:ARG159 4.5 60.3 1.0 CA A:LYS129 4.7 65.0 0.7 CA A:LYS129 4.7 65.2 0.3 CG A:ARG159 4.7 61.4 1.0 CD A:LYS129 4.8 73.9 0.7 O A:ARG159 4.9 66.4 1.0 N A:LYS129 4.9 64.5 0.7 N A:LYS129 4.9 64.5 0.3

Chlorine binding site 5 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl806 b:77.0 occ:1.00 CE A:LYS201 3.4 97.2 1.0 CD A:LYS201 3.6 91.9 1.0 CB A:ALA163 3.8 74.2 1.0 N A:ALA163 3.8 71.7 1.0 N A:TYR162 4.1 64.2 1.0 CA A:ALA163 4.5 72.4 1.0 O A:GLY160 4.5 69.1 1.0 CB A:TYR162 4.7 64.4 1.0 CA A:TYR162 4.8 63.6 1.0 C A:TYR162 4.8 67.5 1.0 NZ A:LYS201 4.8 0.1 1.0 CG A:LYS201 4.8 86.8 1.0 CA A:GLU161 4.9 66.4 1.0 C A:GLU161 4.9 65.1 1.0

Chlorine binding site 6 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl807 b:0.9 occ:1.00 OD1 A:ASN261 3.3 48.4 1.0 CD A:ARG264 3.4 63.2 1.0 NH1 A:ARG264 3.5 66.5 1.0 O A:TYR260 4.0 58.1 1.0 NE2 A:GLN257 4.1 64.8 1.0 O A:ALA271 4.1 0.9 1.0 CB A:ARG264 4.3 61.3 1.0 NE A:ARG264 4.4 65.6 1.0 CZ A:ARG264 4.4 66.2 1.0 C A:TYR260 4.5 53.5 1.0 CG A:ARG264 4.5 63.5 1.0 CG A:ASN261 4.5 47.4 1.0 CA A:ALA271 4.6 99.9 1.0 CA A:ASN261 4.6 50.1 1.0 C A:ALA271 4.7 0.9 1.0 N A:ASN261 4.7 50.6 1.0 O A:ASP270 4.8 89.5 1.0 CB A:TYR260 4.9 49.9 1.0

Chlorine binding site 7 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl808 b:85.7 occ:1.00 N A:GLY308 2.6 81.0 1.0 NZ A:LYS342 2.7 0.2 1.0 CE A:LYS342 3.3 0.2 1.0 CA A:GLY308 3.4 86.6 1.0 C A:GLU307 3.6 77.9 1.0 CA A:GLU307 3.7 77.3 1.0 O A:GLY308 3.7 88.0 1.0 CD1 A:PHE311 4.0 64.3 1.0 C A:GLY308 4.0 88.6 1.0 CB A:PHE311 4.2 67.0 1.0 CB A:GLU307 4.2 85.1 1.0 CG A:PHE311 4.3 63.5 1.0 CG2 A:VAL346 4.6 66.8 1.0 O A:GLU307 4.7 77.5 1.0 CD A:LYS342 4.7 0.0 1.0 CG A:LYS343 4.7 73.7 1.0 CE1 A:PHE311 4.8 61.2 1.0 CG A:LYS342 4.9 0.7 1.0 N A:GLU307 5.0 72.2 1.0

Chlorine binding site 8 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl809 b:55.5 occ:1.00 NH2 A:ARG422 2.6 0.2 1.0 NZ A:LYS453 3.1 50.3 1.0 NE A:ARG422 3.2 95.9 1.0 CZ A:ARG422 3.2 99.3 1.0 NZ A:LYS456 3.4 60.5 1.0 OH A:TYR457 3.6 51.7 1.0 CL A:CL810 3.8 72.4 1.0 NZ A:LYS425 4.0 71.3 1.0 CE2 A:TYR457 4.2 48.5 1.0 CE A:LYS453 4.2 51.5 1.0 CZ A:TYR457 4.3 49.7 1.0 CD A:ARG422 4.4 89.1 1.0 NH1 A:ARG422 4.5 99.4 1.0 CE A:LYS456 4.5 59.4 1.0 CD A:LYS453 4.6 52.4 1.0 CG A:ARG422 4.7 81.5 1.0 CD A:LYS456 4.9 57.0 1.0

Chlorine binding site 9 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl810 b:72.4 occ:1.00 NZ A:LYS425 3.2 71.3 1.0 CL A:CL809 3.8 55.5 1.0 NZ A:LYS456 3.8 60.5 1.0 NH1 A:ARG460 4.2 64.6 1.0 CE A:LYS425 4.6 71.2 1.0 O A:HOH906 4.6 57.5 1.0 CE A:LYS456 4.9 59.4 1.0

Chlorine binding site 10 out of 63 in the The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of The Nata (NAA10P/NAA15P) Amino-Terminal Acetyltrasferase Complex Bound to Accoa within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl811 b:74.6 occ:1.00 CZ A:ARG505 4.0 54.3 1.0 NH2 A:ARG505 4.0 53.9 1.0 NH1 A:ARG505 4.2 54.8 1.0 NE A:ARG505 4.3 55.8 1.0 O A:ARG460 4.3 63.9 1.0 CD A:ARG460 4.3 62.6 1.0 CD1 A:LEU430 4.5 49.6 1.0 NE A:ARG460 4.6 63.7 1.0 CD A:ARG505 4.9 56.7 1.0 CB A:ARG460 4.9 58.2 1.0

G.Liszczak, J.M.Goldberg, H.Foyn, E.J.Petersson, T.Arnesen, R.Marmorstein. Molecular Basis For N-Terminal Acetylation By the Heterodimeric Nata Complex. Nat.Struct.Mol.Biol. V. 20 1098 2013.
ISSN: ISSN 1545-9993
PubMed: 23912279
DOI: 10.1038/NSMB.2636