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Chlorine in PDB 4l1r: Glycoprotein B From Herpes Simplex Virus Type 1, A549T Rate-of-Entry Mutant, Low-pH

Protein crystallography data

The structure of Glycoprotein B From Herpes Simplex Virus Type 1, A549T Rate-of-Entry Mutant, Low-pH, PDB code: 4l1r was solved by S.D.Stampfer, E.E.Heldwein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.47 / 3.03
Space group P 3
Cell size a, b, c (Å), α, β, γ (°) 117.432, 117.432, 160.420, 90.00, 90.00, 120.00
R / Rfree (%) 20.1 / 24.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Glycoprotein B From Herpes Simplex Virus Type 1, A549T Rate-of-Entry Mutant, Low-pH (pdb code 4l1r). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Glycoprotein B From Herpes Simplex Virus Type 1, A549T Rate-of-Entry Mutant, Low-pH, PDB code: 4l1r:

Chlorine binding site 1 out of 1 in 4l1r

Go back to Chlorine Binding Sites List in 4l1r
Chlorine binding site 1 out of 1 in the Glycoprotein B From Herpes Simplex Virus Type 1, A549T Rate-of-Entry Mutant, Low-pH


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Glycoprotein B From Herpes Simplex Virus Type 1, A549T Rate-of-Entry Mutant, Low-pH within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl801

b:85.0
occ:1.00
OG1 A:THR394 3.2 66.0 1.0
ND2 A:ASN511 3.3 53.3 1.0
CG2 A:THR394 3.6 66.6 1.0
CB A:ASN511 3.7 51.0 1.0
CB A:SER387 3.9 56.4 1.0
CB A:THR394 3.9 65.5 1.0
CG A:ASN511 4.0 51.6 1.0
NH1 A:ARG515 4.1 87.1 1.0
CD2 A:HIS512 4.1 65.9 1.0
NE2 A:HIS512 4.1 68.2 1.0
OG A:SER387 4.3 57.8 1.0
NH2 A:ARG515 4.8 89.2 1.0
CZ A:ARG515 4.9 87.5 1.0
CD A:ARG385 4.9 96.4 1.0
CA A:PHE508 5.0 48.0 1.0
CD1 A:PHE508 5.0 50.4 1.0

Reference:

S.D.Stampfer, E.E.Heldwein. N/A N/A.
Page generated: Sun Jul 21 18:39:41 2024

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