Atomistry » Chlorine » PDB 4kwy-4lb8 » 4l9p
Atomistry »
  Chlorine »
    PDB 4kwy-4lb8 »
      4l9p »

Chlorine in PDB 4l9p: Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide

Enzymatic activity of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide

All present enzymatic activity of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide:
2.5.1.58;

Protein crystallography data

The structure of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide, PDB code: 4l9p was solved by M.F.Mabanglo, M.A.Hast, L.S.Beese, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.42 / 1.45
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.236, 90.328, 83.007, 90.00, 111.01, 90.00
R / Rfree (%) 12.5 / 15.2

Other elements in 4l9p:

The structure of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide (pdb code 4l9p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide, PDB code: 4l9p:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4l9p

Go back to Chlorine Binding Sites List in 4l9p
Chlorine binding site 1 out of 3 in the Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:62.7
occ:1.00
 CZ A:PHE202 3.8 19.2 1.0
CE2 A:PHE202 3.9 19.4 1.0
O A:ASN200 3.9 26.6 1.0
CE1 A:PHE202 4.1 19.8 1.0
CD2 A:PHE202 4.4 18.4 1.0
O B:HOH1059 4.4 42.8 1.0
O A:HOH593 4.4 25.1 1.0
CD1 A:PHE202 4.6 18.9 1.0
CG A:PHE202 4.7 16.5 1.0
N A:PHE202 4.9 13.6 1.0
C A:ASN200 4.9 24.8 1.0
CA A:GLU201 5.0 18.9 1.0

Chlorine binding site 2 out of 3 in 4l9p

Go back to Chlorine Binding Sites List in 4l9p
Chlorine binding site 2 out of 3 in the Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl602

b:19.9
occ:1.00
 O B:HOH1009 3.1 18.0 1.0
N B:LYS417 3.2 11.1 1.0
NH1 B:ARG422 3.2 11.0 1.0
CG B:LYS417 3.6 22.2 1.0
CA B:CYS416 3.8 9.7 0.5
CB B:LYS417 3.8 17.2 1.0
CA B:CYS416 3.8 9.7 0.5
C B:CYS416 4.0 10.0 0.5
C B:CYS416 4.0 10.0 0.5
CB B:SER111 4.0 17.6 1.0
CA B:LYS417 4.1 13.7 1.0
CD B:LYS417 4.2 25.9 1.0
OG B:SER111 4.3 17.6 1.0
O B:HOH998 4.3 34.2 1.0
O B:GLN415 4.3 10.2 1.0
SG B:CYS416 4.3 11.4 0.5
CZ B:ARG422 4.3 8.8 1.0
O B:HOH810 4.4 21.6 1.0
CB B:CYS416 4.4 9.8 0.5
CB B:CYS416 4.5 10.0 0.5
NH2 B:ARG422 4.6 9.7 1.0
O B:HOH1054 4.6 42.0 1.0
CE B:LYS417 4.7 29.5 1.0
N B:CYS416 4.9 9.2 0.5
N B:CYS416 4.9 9.1 0.5
O B:SER111 5.0 19.9 1.0
O B:HOH1072 5.0 48.7 1.0

Chlorine binding site 3 out of 3 in 4l9p

Go back to Chlorine Binding Sites List in 4l9p
Chlorine binding site 3 out of 3 in the Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Aspergillus Fumigatus Protein Farnesyltransferase Complexed with the Fii Analog, Fpt-II, and the Kcvvm Peptide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl603

b:58.5
occ:1.00
 O B:HOH1046 2.8 44.0 1.0
O B:HOH910 2.9 26.8 1.0
O B:GLY195 3.7 16.0 1.0
N B:MET197 3.8 8.2 1.0
O A:HOH667 3.9 42.3 1.0
CA B:MET197 3.9 9.2 1.0
CB B:MET197 4.1 13.1 1.0
C B:GLN196 4.1 9.4 1.0
C B:GLY195 4.2 13.8 1.0
O B:GLN196 4.4 11.1 1.0
CE A:MET50 4.6 18.6 1.0
O A:HOH738 4.6 23.9 1.0
OD1 B:ASN185 4.7 15.1 1.0
N B:GLN196 4.7 11.7 1.0
CG2 A:THR75 4.8 10.5 1.0
O B:HOH1029 4.8 42.6 1.0
CA B:GLN196 4.8 10.3 1.0
O B:HOH1036 4.9 39.6 1.0
CA B:GLY195 4.9 14.4 1.0

Reference:

M.F.Mabanglo, M.A.Hast, N.B.Lubock, H.W.Hellinga, L.S.Beese. Crystal Structures of the Fungal Pathogen Aspergillus Fumigatus Protein Farnesyltransferase Complexed with Substrates and Inhibitors Reveal Features For Antifungal Drug Design. Protein Sci. V. 23 289 2014.
ISSN: ISSN 0961-8368
PubMed: 24347326
DOI: 10.1002/PRO.2411
Page generated: Sun Jul 21 18:46:15 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy