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Chlorine in PDB 4lb8: Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution

Protein crystallography data

The structure of Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution, PDB code: 4lb8 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.36 / 2.49
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 64.595, 140.829, 89.289, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 22.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution (pdb code 4lb8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution, PDB code: 4lb8:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 4lb8

Go back to Chlorine Binding Sites List in 4lb8
Chlorine binding site 1 out of 5 in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl400

b:71.1
occ:1.00
OH A:TYR229 3.2 78.0 1.0
NE A:ARG296 3.3 87.6 1.0
CE2 A:TYR229 3.4 65.3 1.0
N A:GLY297 3.6 45.5 1.0
NH2 A:ARG296 3.8 74.7 1.0
CZ A:TYR229 3.8 75.1 1.0
CA A:GLY297 3.9 44.1 1.0
OG1 A:THR231 3.9 54.4 1.0
CB A:ARG296 4.0 45.7 1.0
CZ A:ARG296 4.0 97.2 1.0
C A:ARG296 4.1 49.1 1.0
CG A:ARG296 4.2 53.9 1.0
CD A:ARG296 4.3 69.1 1.0
NE A:ARG199 4.4 58.0 1.0
CD2 A:TYR229 4.7 64.5 1.0
CA A:ARG296 4.7 45.3 1.0
CB A:THR231 4.7 50.4 1.0
O A:ARG296 4.7 48.7 1.0
O A:HOH530 4.8 68.6 1.0
O A:SER230 4.9 56.2 1.0
CD A:ARG199 4.9 51.0 1.0

Chlorine binding site 2 out of 5 in 4lb8

Go back to Chlorine Binding Sites List in 4lb8
Chlorine binding site 2 out of 5 in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:68.0
occ:1.00
N A:ASN43 3.6 61.1 1.0
N A:ASP44 3.9 68.9 1.0
CA A:ASN43 4.2 62.5 1.0
C A:ILE42 4.3 61.1 1.0
CA A:ILE42 4.3 57.2 1.0
OD1 A:ASP44 4.4 97.6 1.0
C A:ASN43 4.6 70.3 1.0
CB A:ILE42 4.7 59.2 1.0
CA A:ASP44 4.8 70.4 1.0
CG A:ASP44 4.8 95.2 1.0

Chlorine binding site 3 out of 5 in 4lb8

Go back to Chlorine Binding Sites List in 4lb8
Chlorine binding site 3 out of 5 in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:55.3
occ:1.00
N A:LEU186 3.4 36.1 1.0
CB A:ASP185 3.5 38.3 1.0
CA A:ASP185 3.6 35.2 1.0
CG A:LEU186 3.9 36.2 1.0
C A:ASP185 4.0 39.2 1.0
CG A:PHE305 4.0 35.9 1.0
CB A:PHE305 4.1 35.2 1.0
CD2 A:PHE305 4.1 35.5 1.0
CB A:LEU186 4.3 33.9 1.0
CA A:LEU186 4.4 34.7 1.0
CD1 A:PHE305 4.4 37.6 1.0
CD1 A:LEU186 4.5 36.0 1.0
CE2 A:PHE305 4.7 38.5 1.0
CG A:ASP185 4.8 53.0 1.0
N A:ASP185 5.0 34.2 1.0
CD2 A:LEU186 5.0 37.3 1.0

Chlorine binding site 4 out of 5 in 4lb8

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Chlorine binding site 4 out of 5 in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:65.2
occ:1.00
N A:GLY210 3.2 38.8 1.0
N A:SER209 3.8 42.1 1.0
O A:HOH568 3.9 56.7 1.0
CA A:SER209 3.9 42.2 1.0
C A:SER209 3.9 44.0 1.0
CA A:GLY210 4.0 37.1 1.0
CG2 A:VAL207 4.0 39.0 1.0
CG1 A:VAL207 4.2 39.0 1.0
NZ A:LYS282 4.2 56.1 1.0
CD A:LYS282 4.4 49.1 1.0
CB A:VAL207 4.7 39.5 1.0
C A:SER208 4.7 44.4 1.0
CE A:LYS282 4.9 48.6 1.0
O A:VAL207 4.9 43.0 1.0
C A:VAL207 5.0 42.3 1.0
O A:SER209 5.0 45.1 1.0

Chlorine binding site 5 out of 5 in 4lb8

Go back to Chlorine Binding Sites List in 4lb8
Chlorine binding site 5 out of 5 in the Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A DUF4848 Family Protein (BT3222) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.49 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:87.7
occ:1.00
N A:ASP267 3.2 44.4 1.0
CA A:ILE266 3.6 35.8 1.0
O A:ASP267 3.7 59.0 1.0
O A:ALA265 3.9 42.0 1.0
C A:ILE266 3.9 44.1 1.0
C A:ASP267 4.1 55.1 1.0
CA A:ASP267 4.2 45.2 1.0
CG2 A:ILE266 4.4 36.9 1.0
N A:ILE266 4.5 37.1 1.0
CB A:ILE266 4.5 36.9 1.0
O A:HOH563 4.6 46.0 1.0
C A:ALA265 4.6 40.7 1.0
CB A:ASP267 4.6 46.6 1.0
CG1 A:ILE266 5.0 36.8 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 18:19:50 2025

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