Chlorine in PDB 4ldw: Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure

The structure of Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure, PDB code: 4ldw was solved by D.R.Boer, M.Coll, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.94 / 2.67
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	73.260, 83.670, 79.027, 90.00, 117.61, 90.00
R / Rfree (%)	21.6 / 27.9

The binding sites of Chlorine atom in the Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure (pdb code 4ldw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure, PDB code: 4ldw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:62.2 occ:1.00 NH1 A:ARG270 3.3 64.7 1.0 N A:GLU299 3.6 70.6 1.0 CE A:MET226 3.8 84.3 1.0 CD1 A:PHE298 3.9 59.1 1.0 CB A:GLU299 3.9 75.2 1.0 CD1 A:LEU31 4.0 76.3 1.0 CA A:PHE298 4.1 64.9 1.0 CB A:PHE298 4.3 63.4 1.0 CA A:GLU299 4.4 75.2 1.0 C A:PHE298 4.4 68.9 1.0 CD A:ARG270 4.4 61.0 1.0 CZ A:ARG270 4.5 65.4 1.0 CG A:PHE298 4.5 59.8 1.0 CG A:GLU299 4.6 77.7 1.0 CE1 A:PHE298 4.8 56.9 1.0 NE A:ARG270 5.0 63.0 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Dna Binding Domain of Arabidopsis Thaliana Auxin Response Factor 1, P21 Structure within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl402 b:84.8 occ:1.00 N A:LEU34 3.1 49.7 1.0 O A:LEU34 3.4 47.4 1.0 CE1 A:HIS25 3.5 52.3 1.0 CA A:LEU34 3.9 50.2 1.0 CA A:THR33 3.9 56.2 1.0 C A:THR33 4.0 52.9 1.0 CB A:LEU34 4.1 50.6 1.0 O A:VAL32 4.1 65.3 1.0 C A:LEU34 4.1 50.2 1.0 NE2 A:HIS25 4.3 51.7 1.0 ND1 A:HIS25 4.4 52.4 1.0 CG2 A:THR33 4.6 59.4 1.0 O A:HOH512 4.6 67.5 1.0 CG A:LEU34 4.7 49.4 1.0 NH2 A:ARG82 4.8 55.5 1.0 C A:VAL32 4.8 61.3 1.0 N A:THR33 4.8 56.9 1.0 CB A:THR33 4.9 57.0 1.0

D.R.Boer, A.Freire-Rios, W.A.Van Den Berg, T.Saaki, I.W.Manfield, S.Kepinski, I.Lopez-Vidrieo, J.M.Franco-Zorrilla, S.C.De Vries, R.Solano, D.Weijers, M.Coll. Structural Basis For Dna Binding Specificity By the Auxin-Dependent Arf Transcription Factors. Cell(Cambridge,Mass.) V. 156 577 2014.
ISSN: ISSN 0092-8674
PubMed: 24485461
DOI: 10.1016/J.CELL.2013.12.027