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Chlorine in PDB 4lwt: The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344

Protein crystallography data

The structure of The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344, PDB code: 4lwt was solved by B.J.Graves, C.Lukacs, U.Kammlott, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.38 / 1.60
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 43.066, 67.976, 67.168, 90.00, 90.00, 90.00
R / Rfree (%) 25.8 / 27.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344 (pdb code 4lwt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344, PDB code: 4lwt:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4lwt

Go back to Chlorine Binding Sites List in 4lwt
Chlorine binding site 1 out of 2 in the The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:23.0
occ:1.00
CL1 A:20Q201 0.0 23.0 1.0
C13 A:20Q201 1.7 28.7 1.0
C14 A:20Q201 2.7 32.0 1.0
C12 A:20Q201 2.7 33.4 1.0
CG A:HIS92 3.5 16.0 1.0
ND1 A:HIS92 3.7 16.4 1.0
CB A:HIS92 3.8 15.4 1.0
CE2 A:TYR96 3.8 18.6 1.0
CD2 A:HIS92 3.8 16.4 1.0
CA A:HIS92 3.8 16.3 1.0
CD2 A:LEU50 3.9 16.9 1.0
C15 A:20Q201 3.9 34.6 1.0
CD2 A:TYR96 4.0 16.5 1.0
CG2 A:ILE95 4.0 14.2 1.0
C11 A:20Q201 4.0 35.0 1.0
CB A:ILE95 4.0 14.3 1.0
O A:HIS92 4.1 15.5 1.0
CD1 A:ILE95 4.1 15.2 1.0
CE1 A:HIS92 4.1 18.9 1.0
NE2 A:HIS92 4.2 19.1 1.0
CD1 A:LEU50 4.3 19.3 1.0
C A:HIS92 4.5 17.0 1.0
C16 A:20Q201 4.5 35.4 1.0
CG1 A:ILE95 4.7 15.2 1.0
CG A:LEU50 4.7 16.1 1.0
N A:HIS92 5.0 16.2 1.0

Chlorine binding site 2 out of 2 in 4lwt

Go back to Chlorine Binding Sites List in 4lwt
Chlorine binding site 2 out of 2 in the The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The 1.6A Crystal Structure of Humanized Xenopus MDM2 with RO5027344 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:25.8
occ:1.00
CL6 A:20Q201 0.0 25.8 1.0
C6 A:20Q201 1.7 27.2 1.0
C5 A:20Q201 2.7 28.1 1.0
C7 A:20Q201 2.7 29.3 1.0
CD1 A:ILE57 3.7 13.3 1.0
C9 A:20Q201 3.9 32.5 1.0
CG2 A:ILE95 3.9 14.2 1.0
CZ A:PHE87 3.9 13.1 1.0
C4 A:20Q201 3.9 32.3 1.0
CB A:LEU53 4.0 16.1 1.0
CE1 A:PHE87 4.1 16.6 1.0
CD1 A:LEU53 4.2 19.8 1.0
CE2 A:PHE82 4.4 21.9 1.0
C8 A:20Q201 4.4 34.6 1.0
CD1 A:ILE95 4.4 15.2 1.0
CZ A:PHE82 4.6 22.8 1.0
CG A:LEU53 4.7 20.1 1.0
CD2 A:LEU50 4.7 16.9 1.0
CG1 A:ILE95 4.8 15.2 1.0
C A:LEU53 4.9 13.6 1.0

Reference:

Z.Zhang, Q.Ding, J.J.Liu, J.Zhang, N.Jiang, X.J.Chu, D.Bartkovitz, K.C.Luk, C.Janson, C.Tovar, Z.M.Filipovic, B.Higgins, K.Glenn, K.Packman, L.T.Vassilev, B.Graves. Discovery of Potent and Selective Spiroindolinone MDM2 Inhibitor, RO8994, For Cancer Therapy. Bioorg.Med.Chem. V. 22 4001 2014.
ISSN: ISSN 0968-0896
PubMed: 24997575
DOI: 10.1016/J.BMC.2014.05.072
Page generated: Sat Dec 12 10:54:04 2020

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