Atomistry » Chlorine » PDB 4lxd-4m54 » 4m33
Atomistry »
  Chlorine »
    PDB 4lxd-4m54 »
      4m33 »

Chlorine in PDB 4m33: Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis

Protein crystallography data

The structure of Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis, PDB code: 4m33 was solved by S.M.Williams, A.V.Chandran, M.S.Vijayabaskar, S.Roy, H.Balaram, S.Vishveshwara, M.Vijayan, D.Chatterji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.22
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 90.670, 90.670, 419.691, 90.00, 90.00, 120.00
R / Rfree (%) 17.5 / 21.3

Other elements in 4m33:

The structure of Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis also contains other interesting chemical elements:

Magnesium (Mg) 6 atoms
Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis (pdb code 4m33). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis, PDB code: 4m33:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4m33

Go back to Chlorine Binding Sites List in 4m33
Chlorine binding site 1 out of 2 in the Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:21.1
occ:0.33
O A:HOH389 2.4 2.0 0.3
NH2 A:ARG50 3.3 3.6 1.0
CD1 A:LEU54 3.7 5.6 1.0
CZ A:ARG50 4.3 5.2 1.0
OD1 A:ASP51 4.4 6.0 1.0
NH1 A:ARG50 4.5 4.3 1.0

Chlorine binding site 2 out of 2 in 4m33

Go back to Chlorine Binding Sites List in 4m33
Chlorine binding site 2 out of 2 in the Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Gated-Pore Mutant H141D of Second Dna-Binding Protein Under Starvation From Mycobacterium Smegmatis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl204

b:14.9
occ:1.00
O C:HOH388 2.7 4.7 1.0
NH1 B:ARG50 3.3 4.2 1.0
NH1 C:ARG50 3.4 6.5 1.0
O B:HOH325 4.0 22.3 1.0
CD1 B:LEU54 4.0 10.0 1.0
CD1 C:LEU54 4.1 8.2 1.0
OD1 B:ASP51 4.3 7.9 1.0
CZ B:ARG50 4.4 6.4 1.0
OD1 C:ASP51 4.4 8.5 1.0
CZ C:ARG50 4.4 7.6 1.0
NH2 B:ARG50 4.6 5.2 1.0
NH2 C:ARG50 4.7 6.7 1.0
O B:HOH346 5.0 21.1 1.0

Reference:

S.M.Williams, A.V.Chandran, M.S.Vijayabaskar, S.Roy, H.Balaram, S.Vishveshwara, M.Vijayan, D.Chatterji. A Histidine Aspartate Ionic Lock Gates the Iron Passage in Miniferritins From Mycobacterium Smegmatis J.Biol.Chem. V. 289 11042 2014.
ISSN: ISSN 0021-9258
PubMed: 24573673
DOI: 10.1074/JBC.M113.524421
Page generated: Sat Dec 12 10:54:32 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy