Chlorine in PDB 4m3s: Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes
Protein crystallography data
The structure of Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes, PDB code: 4m3s
was solved by
K.A.Majorek,
M.Chruszcz,
X.Xu,
M.Cymborowski,
H.Zheng,
A.Savchenko,
A.Edwards,
A.Joachimiak,
W.Minor,
Midwest Center For Structuralgenomics (Mcsg),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.83 /
1.30
|
Space group
|
P 21 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
56.950,
75.513,
39.481,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
13.3 /
16.9
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes
(pdb code 4m3s). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes, PDB code: 4m3s:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 4m3s
Go back to
Chlorine Binding Sites List in 4m3s
Chlorine binding site 1 out
of 4 in the Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl203
b:12.2
occ:0.90
|
O
|
A:HOH4026
|
3.1
|
15.5
|
1.0
|
ND2
|
A:ASN121
|
3.3
|
14.6
|
1.0
|
N
|
A:PHE118
|
3.3
|
8.3
|
1.0
|
CA
|
A:CYS117
|
3.7
|
8.7
|
1.0
|
CB
|
A:TYR28
|
3.8
|
14.5
|
1.0
|
CB
|
A:ASN121
|
3.9
|
11.4
|
1.0
|
SG
|
A:CYS117
|
3.9
|
13.4
|
1.0
|
CD2
|
A:PHE118
|
3.9
|
9.5
|
1.0
|
O
|
A:TYR28
|
3.9
|
20.1
|
1.0
|
C
|
A:CYS117
|
4.0
|
8.4
|
1.0
|
C8
|
A:EPE205
|
4.1
|
15.0
|
0.8
|
CG
|
A:ASN121
|
4.1
|
12.9
|
1.0
|
C5
|
A:EPE205
|
4.1
|
13.1
|
0.8
|
CB
|
A:PHE118
|
4.2
|
9.1
|
1.0
|
CA
|
A:PHE118
|
4.3
|
8.1
|
1.0
|
O
|
A:HOH4290
|
4.3
|
34.9
|
1.0
|
CB
|
A:CYS117
|
4.3
|
10.9
|
1.0
|
CA
|
A:TYR28
|
4.4
|
12.8
|
1.0
|
C
|
A:TYR28
|
4.4
|
14.2
|
1.0
|
CG
|
A:TYR28
|
4.5
|
13.2
|
1.0
|
O
|
A:SER116
|
4.5
|
11.4
|
1.0
|
CG
|
A:PHE118
|
4.5
|
9.2
|
1.0
|
C7
|
A:EPE205
|
4.7
|
15.0
|
0.8
|
O
|
A:PHE118
|
4.7
|
8.5
|
1.0
|
O
|
A:HOH4135
|
4.7
|
35.2
|
1.0
|
N
|
A:CYS117
|
4.9
|
8.6
|
1.0
|
CE2
|
A:PHE118
|
4.9
|
10.3
|
1.0
|
CD1
|
A:TYR28
|
5.0
|
13.5
|
1.0
|
N4
|
A:EPE205
|
5.0
|
10.5
|
0.8
|
C
|
A:PHE118
|
5.0
|
7.9
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 4m3s
Go back to
Chlorine Binding Sites List in 4m3s
Chlorine binding site 2 out
of 4 in the Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl204
b:27.1
occ:1.00
|
O
|
A:HOH4043
|
3.1
|
20.4
|
1.0
|
O
|
A:HOH4235
|
3.2
|
31.1
|
1.0
|
CA
|
A:GLY91
|
3.3
|
13.4
|
1.0
|
N
|
A:ARG94
|
3.4
|
11.3
|
0.5
|
N
|
A:ARG94
|
3.4
|
11.1
|
0.5
|
N
|
A:GLY91
|
3.4
|
13.5
|
1.0
|
C
|
A:GLY91
|
3.6
|
12.7
|
1.0
|
N
|
A:ALA93
|
3.6
|
12.0
|
1.0
|
N
|
A:VAL92
|
3.7
|
12.2
|
1.0
|
O
|
A:HOH4038
|
3.8
|
19.5
|
1.0
|
CB
|
A:ALA93
|
3.8
|
13.8
|
1.0
|
CB
|
A:ARG94
|
3.9
|
14.1
|
0.5
|
CB
|
A:ARG94
|
4.0
|
13.2
|
0.5
|
CA
|
A:ALA93
|
4.0
|
12.0
|
1.0
|
CD2
|
A:LEU127
|
4.1
|
16.3
|
1.0
|
C
|
A:ALA93
|
4.2
|
11.2
|
1.0
|
O
|
A:GLY91
|
4.2
|
13.4
|
1.0
|
CA
|
A:ARG94
|
4.2
|
12.4
|
0.5
|
CA
|
A:ARG94
|
4.3
|
11.9
|
0.5
|
O
|
A:HOH4283
|
4.3
|
43.0
|
1.0
|
C
|
A:VAL92
|
4.4
|
11.2
|
1.0
|
CD1
|
A:LEU127
|
4.5
|
19.6
|
1.0
|
C
|
A:LEU90
|
4.6
|
18.6
|
1.0
|
CA
|
A:VAL92
|
4.7
|
11.1
|
1.0
|
N
|
A:LEU90
|
4.7
|
14.4
|
1.0
|
NE
|
A:ARG94
|
4.8
|
21.8
|
0.5
|
O
|
A:HOH4240
|
4.8
|
37.2
|
1.0
|
CG
|
A:LEU127
|
4.9
|
14.8
|
1.0
|
C
|
A:GLY89
|
4.9
|
16.7
|
1.0
|
N
|
A:GLY89
|
5.0
|
14.9
|
1.0
|
CA
|
A:GLY89
|
5.0
|
16.3
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 4m3s
Go back to
Chlorine Binding Sites List in 4m3s
Chlorine binding site 3 out
of 4 in the Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl206
b:25.3
occ:0.80
|
O
|
A:HOH4143
|
3.2
|
32.5
|
1.0
|
N
|
A:GLY51
|
3.2
|
10.0
|
1.0
|
O
|
A:HOH4022
|
3.5
|
17.9
|
1.0
|
CD
|
A:ARG50
|
3.8
|
17.8
|
1.0
|
CA
|
A:ARG50
|
3.9
|
12.1
|
1.0
|
C
|
A:ARG50
|
4.1
|
9.8
|
1.0
|
CA
|
A:GLY51
|
4.1
|
10.3
|
1.0
|
CB
|
A:ARG50
|
4.1
|
12.8
|
1.0
|
O
|
A:HOH4080
|
4.5
|
16.4
|
0.5
|
CG
|
A:ARG50
|
4.6
|
14.0
|
1.0
|
O
|
A:HOH4080
|
4.7
|
21.1
|
0.5
|
OH
|
A:TYR108
|
4.9
|
23.4
|
1.0
|
NE
|
A:ARG50
|
5.0
|
20.8
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 4m3s
Go back to
Chlorine Binding Sites List in 4m3s
Chlorine binding site 4 out
of 4 in the Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl207
b:24.0
occ:0.80
|
N
|
A:ALA86
|
3.3
|
15.1
|
1.0
|
O
|
A:HOH4311
|
3.3
|
25.4
|
1.0
|
CD
|
A:PRO85
|
3.6
|
13.7
|
1.0
|
N
|
A:PRO85
|
3.6
|
11.9
|
1.0
|
CB
|
A:ALA86
|
3.6
|
21.0
|
1.0
|
CB
|
A:ALA84
|
3.7
|
11.7
|
1.0
|
C
|
A:ALA84
|
4.0
|
10.0
|
1.0
|
CA
|
A:ALA86
|
4.1
|
17.0
|
1.0
|
CB
|
A:PRO85
|
4.2
|
21.6
|
1.0
|
CG
|
A:PRO85
|
4.2
|
21.0
|
1.0
|
CA
|
A:ALA84
|
4.2
|
10.4
|
1.0
|
CA
|
A:PRO85
|
4.2
|
15.2
|
1.0
|
C
|
A:PRO85
|
4.3
|
14.6
|
1.0
|
O
|
A:ALA84
|
4.7
|
10.1
|
1.0
|
O
|
A:HOH4187
|
4.9
|
31.1
|
1.0
|
|
Reference:
K.A.Majorek,
M.L.Kuhn,
M.Chruszcz,
W.F.Anderson,
W.Minor.
Crystal Structure of A Gnat Superfamily Acetyltransferase PA4794 in Complex with Hepes To Be Published.
Page generated: Sun Jul 21 19:32:37 2024
|