Chlorine in PDB 4mh7: Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Enzymatic activity of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
All present enzymatic activity of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896:
2.7.10.1;
Protein crystallography data
The structure of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896, PDB code: 4mh7
was solved by
W.Zhang,
A.Mciver,
M.A.Stashko,
D.Deryckere,
B.R.Branchford,
D.Hunter,
D.B.Kireev,
M.J.Miley,
J.Norris-Drouin,
W.M.Stewart,
M.Lee,
S.Sather,
Y.Zhou,
J.A.Dipaola,
M.Machius,
W.P.Janzen,
H.S.Earp,
D.K.Graham,
S.Frye,
X.Wang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
32.06 /
2.51
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
50.874,
90.864,
69.587,
90.00,
99.98,
90.00
|
R / Rfree (%)
|
22.3 /
27.9
|
Other elements in 4mh7:
The structure of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
(pdb code 4mh7). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the
Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896, PDB code: 4mh7:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Chlorine binding site 1 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 1 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl901
b:24.7
occ:1.00
|
H
|
A:LYS820
|
2.3
|
29.7
|
1.0
|
HD2
|
A:PRO802
|
2.7
|
29.4
|
1.0
|
HD2
|
A:LYS820
|
2.9
|
39.5
|
1.0
|
HA
|
A:LEU819
|
2.9
|
28.0
|
1.0
|
N
|
A:LYS820
|
3.1
|
24.7
|
1.0
|
HD23
|
A:LEU819
|
3.1
|
27.0
|
1.0
|
HB2
|
A:LYS820
|
3.2
|
33.5
|
1.0
|
HA
|
A:TYR801
|
3.2
|
30.4
|
1.0
|
HD13
|
B:LEU688
|
3.5
|
33.1
|
1.0
|
HZ2
|
A:TRP791
|
3.6
|
27.5
|
1.0
|
H
|
A:TYR801
|
3.6
|
30.4
|
1.0
|
CD
|
A:PRO802
|
3.7
|
24.5
|
1.0
|
HD22
|
A:LEU819
|
3.7
|
27.0
|
1.0
|
HG3
|
A:LYS820
|
3.7
|
36.2
|
1.0
|
HD11
|
B:LEU688
|
3.8
|
33.1
|
1.0
|
CA
|
A:LEU819
|
3.8
|
23.4
|
1.0
|
CD
|
A:LYS820
|
3.8
|
32.9
|
1.0
|
CB
|
A:LYS820
|
3.8
|
28.0
|
1.0
|
CD2
|
A:LEU819
|
3.9
|
22.5
|
1.0
|
C
|
A:LEU819
|
3.9
|
24.2
|
1.0
|
CG
|
A:LYS820
|
4.0
|
30.1
|
1.0
|
CZ2
|
A:TRP791
|
4.0
|
22.9
|
1.0
|
HD3
|
A:PRO802
|
4.0
|
29.4
|
1.0
|
CA
|
A:LYS820
|
4.0
|
25.5
|
1.0
|
CA
|
A:TYR801
|
4.0
|
25.4
|
1.0
|
HG2
|
A:PRO802
|
4.0
|
28.7
|
1.0
|
CD1
|
B:LEU688
|
4.1
|
27.6
|
1.0
|
HB3
|
A:LEU819
|
4.1
|
29.1
|
1.0
|
N
|
A:TYR801
|
4.2
|
25.3
|
1.0
|
CG
|
A:PRO802
|
4.3
|
23.9
|
1.0
|
CB
|
A:LEU819
|
4.4
|
24.3
|
1.0
|
HD1
|
A:TYR801
|
4.4
|
31.1
|
1.0
|
HD3
|
A:LYS820
|
4.4
|
39.5
|
1.0
|
HZ2
|
A:LYS820
|
4.4
|
43.0
|
1.0
|
HD22
|
B:LEU688
|
4.5
|
31.2
|
1.0
|
HE3
|
A:LYS820
|
4.5
|
40.9
|
1.0
|
HD21
|
A:LEU819
|
4.5
|
27.0
|
1.0
|
HG3
|
A:PRO802
|
4.6
|
28.7
|
1.0
|
N
|
A:PRO802
|
4.6
|
25.2
|
1.0
|
HE1
|
A:TRP791
|
4.6
|
28.3
|
1.0
|
HD21
|
B:LEU688
|
4.6
|
31.2
|
1.0
|
O
|
A:ARG818
|
4.6
|
24.3
|
1.0
|
CE2
|
A:TRP791
|
4.6
|
23.2
|
1.0
|
CH2
|
A:TRP791
|
4.6
|
24.0
|
1.0
|
HH2
|
A:TRP791
|
4.6
|
28.8
|
1.0
|
O
|
A:LYS820
|
4.7
|
24.2
|
1.0
|
CE
|
A:LYS820
|
4.7
|
34.1
|
1.0
|
HB3
|
A:LYS820
|
4.7
|
33.5
|
1.0
|
HH
|
A:TYR812
|
4.7
|
34.0
|
1.0
|
HD12
|
B:LEU688
|
4.7
|
33.1
|
1.0
|
CG
|
A:LEU819
|
4.7
|
23.4
|
1.0
|
CD1
|
A:TYR801
|
4.8
|
25.9
|
1.0
|
HA
|
A:LYS820
|
4.8
|
30.6
|
1.0
|
C
|
A:TYR801
|
4.8
|
25.7
|
1.0
|
C
|
A:LYS820
|
4.8
|
25.6
|
1.0
|
NE1
|
A:TRP791
|
4.9
|
23.6
|
1.0
|
N
|
A:LEU819
|
4.9
|
24.7
|
1.0
|
CD2
|
B:LEU688
|
4.9
|
26.0
|
1.0
|
HG2
|
A:LYS820
|
4.9
|
36.2
|
1.0
|
|
Chlorine binding site 2 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 2 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl902
b:24.7
occ:1.00
|
O
|
B:HOH1014
|
3.0
|
25.2
|
1.0
|
HA
|
A:MET798
|
3.0
|
24.6
|
1.0
|
HA
|
B:MET798
|
3.0
|
23.1
|
1.0
|
HG2
|
B:MET798
|
3.0
|
29.4
|
1.0
|
HG2
|
A:MET798
|
3.1
|
29.2
|
1.0
|
O
|
B:HOH1005
|
3.1
|
18.8
|
1.0
|
O
|
A:HOH1004
|
3.1
|
17.9
|
1.0
|
HH22
|
A:ARG687
|
3.3
|
34.9
|
1.0
|
HH11
|
B:ARG687
|
3.7
|
39.6
|
1.0
|
HH12
|
A:ARG687
|
3.7
|
36.3
|
1.0
|
CG
|
B:MET798
|
3.8
|
24.5
|
1.0
|
HG3
|
B:MET798
|
3.8
|
29.4
|
1.0
|
CA
|
A:MET798
|
3.9
|
20.5
|
1.0
|
CG
|
A:MET798
|
3.9
|
24.4
|
1.0
|
HG3
|
A:MET798
|
3.9
|
29.2
|
1.0
|
CA
|
B:MET798
|
3.9
|
19.2
|
1.0
|
HH12
|
B:ARG687
|
3.9
|
39.6
|
1.0
|
O
|
A:GLY797
|
4.0
|
21.1
|
1.0
|
O
|
B:GLY797
|
4.1
|
21.4
|
1.0
|
NH2
|
A:ARG687
|
4.1
|
29.1
|
1.0
|
NH1
|
B:ARG687
|
4.2
|
33.0
|
1.0
|
N
|
A:MET798
|
4.2
|
20.9
|
1.0
|
N
|
B:MET798
|
4.3
|
20.4
|
1.0
|
HD22
|
A:LEU684
|
4.3
|
27.1
|
1.0
|
C
|
A:GLY797
|
4.3
|
20.5
|
1.0
|
HD21
|
A:LEU684
|
4.3
|
27.1
|
1.0
|
HD22
|
B:LEU684
|
4.3
|
26.2
|
1.0
|
HD21
|
B:LEU684
|
4.3
|
26.2
|
1.0
|
C
|
B:GLY797
|
4.4
|
22.1
|
1.0
|
CB
|
B:MET798
|
4.4
|
21.5
|
1.0
|
CB
|
A:MET798
|
4.4
|
23.2
|
1.0
|
H
|
B:THR799
|
4.4
|
23.3
|
1.0
|
H
|
A:THR799
|
4.5
|
25.3
|
1.0
|
NH1
|
A:ARG687
|
4.5
|
30.2
|
1.0
|
CD2
|
B:LEU684
|
4.6
|
21.9
|
1.0
|
CD2
|
A:LEU684
|
4.7
|
22.6
|
1.0
|
HD23
|
B:LEU684
|
4.7
|
26.2
|
1.0
|
HH21
|
A:ARG687
|
4.7
|
34.9
|
1.0
|
HB3
|
B:MET798
|
4.7
|
25.8
|
1.0
|
H
|
A:MET798
|
4.7
|
25.1
|
1.0
|
HD23
|
A:LEU684
|
4.7
|
27.1
|
1.0
|
H
|
B:MET798
|
4.8
|
24.5
|
1.0
|
HB3
|
A:MET798
|
4.8
|
27.8
|
1.0
|
CZ
|
A:ARG687
|
4.8
|
33.7
|
1.0
|
C
|
A:MET798
|
5.0
|
19.5
|
1.0
|
O
|
A:HOH1005
|
5.0
|
23.2
|
1.0
|
C
|
B:MET798
|
5.0
|
21.4
|
1.0
|
|
Chlorine binding site 3 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 3 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl903
b:52.4
occ:1.00
|
HD2
|
A:TYR685
|
3.2
|
39.9
|
1.0
|
HD1
|
A:TYR682
|
3.4
|
32.4
|
1.0
|
H172
|
A:MH7906
|
3.6
|
45.0
|
1.0
|
H171
|
A:MH7906
|
3.9
|
45.0
|
1.0
|
H173
|
A:MH7906
|
3.9
|
45.0
|
1.0
|
HA
|
A:TYR676
|
4.0
|
37.7
|
1.0
|
HE1
|
A:TYR682
|
4.0
|
35.4
|
1.0
|
HD3
|
A:PRO692
|
4.0
|
47.9
|
1.0
|
C17
|
A:MH7906
|
4.0
|
37.5
|
1.0
|
HE2
|
A:TYR685
|
4.0
|
39.4
|
1.0
|
CD2
|
A:TYR685
|
4.1
|
33.3
|
1.0
|
O
|
A:TYR676
|
4.1
|
31.7
|
1.0
|
CD1
|
A:TYR682
|
4.2
|
27.0
|
1.0
|
HD1
|
A:TYR676
|
4.2
|
46.7
|
1.0
|
CE1
|
A:TYR682
|
4.4
|
29.5
|
1.0
|
CE2
|
A:TYR685
|
4.5
|
32.9
|
1.0
|
HG3
|
A:PRO692
|
4.5
|
43.2
|
1.0
|
CA
|
A:TYR676
|
4.8
|
31.4
|
1.0
|
C
|
A:TYR676
|
4.8
|
30.4
|
1.0
|
HA
|
A:TYR682
|
4.8
|
28.0
|
1.0
|
CD
|
A:PRO692
|
4.8
|
39.9
|
1.0
|
HB3
|
A:TYR676
|
4.8
|
38.1
|
1.0
|
CD1
|
A:TYR676
|
5.0
|
38.9
|
1.0
|
HD2
|
A:PRO692
|
5.0
|
47.9
|
1.0
|
|
Chlorine binding site 4 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 4 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl904
b:30.0
occ:1.00
|
H
|
A:LEU589
|
2.3
|
35.5
|
1.0
|
HH22
|
A:ARG584
|
2.6
|
42.9
|
1.0
|
HA
|
A:ILE588
|
3.0
|
37.2
|
1.0
|
N
|
A:LEU589
|
3.2
|
29.6
|
1.0
|
HH12
|
A:ARG584
|
3.2
|
43.8
|
1.0
|
HB2
|
A:LEU589
|
3.2
|
37.6
|
1.0
|
NH2
|
A:ARG584
|
3.5
|
35.8
|
1.0
|
HG
|
A:LEU589
|
3.6
|
40.3
|
1.0
|
HG23
|
A:ILE588
|
3.8
|
36.8
|
1.0
|
CA
|
A:ILE588
|
3.8
|
31.0
|
1.0
|
CB
|
A:LEU589
|
3.9
|
31.4
|
1.0
|
NH1
|
A:ARG584
|
3.9
|
36.5
|
1.0
|
HD13
|
A:ILE588
|
4.0
|
39.9
|
1.0
|
HD12
|
A:LEU589
|
4.0
|
45.8
|
1.0
|
C
|
A:ILE588
|
4.0
|
30.5
|
1.0
|
HH21
|
A:ARG584
|
4.0
|
42.9
|
1.0
|
O
|
A:LEU587
|
4.0
|
31.8
|
1.0
|
CA
|
A:LEU589
|
4.0
|
30.5
|
1.0
|
CG
|
A:LEU589
|
4.1
|
33.6
|
1.0
|
CZ
|
A:ARG584
|
4.2
|
38.7
|
1.0
|
O
|
A:LEU589
|
4.2
|
30.1
|
1.0
|
HD12
|
A:ILE588
|
4.3
|
39.9
|
1.0
|
CG2
|
A:ILE588
|
4.5
|
30.6
|
1.0
|
HG22
|
A:ILE588
|
4.5
|
36.8
|
1.0
|
CD1
|
A:LEU589
|
4.6
|
38.1
|
1.0
|
CD1
|
A:ILE588
|
4.6
|
33.3
|
1.0
|
C
|
A:LEU589
|
4.6
|
29.7
|
1.0
|
HH11
|
A:ARG584
|
4.7
|
43.8
|
1.0
|
CB
|
A:ILE588
|
4.7
|
30.6
|
1.0
|
HB3
|
A:LEU589
|
4.8
|
37.6
|
1.0
|
N
|
A:ILE588
|
4.8
|
30.6
|
1.0
|
C
|
A:LEU587
|
4.8
|
31.5
|
1.0
|
HA
|
A:LEU589
|
4.9
|
36.6
|
1.0
|
|
Chlorine binding site 5 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 5 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl901
b:34.9
occ:1.00
|
HH11
|
B:ARG651
|
2.0
|
49.0
|
1.0
|
HH12
|
B:ARG732
|
2.1
|
31.4
|
1.0
|
H
|
B:ARG651
|
2.5
|
33.2
|
1.0
|
HH22
|
B:ARG732
|
2.5
|
30.4
|
1.0
|
HG2
|
B:ARG651
|
2.6
|
40.7
|
1.0
|
NH1
|
B:ARG651
|
2.7
|
40.9
|
1.0
|
HH12
|
B:ARG651
|
2.9
|
49.0
|
1.0
|
NH1
|
B:ARG732
|
2.9
|
26.1
|
1.0
|
HG3
|
B:PRO672
|
3.1
|
34.7
|
1.0
|
HA
|
B:ILE650
|
3.2
|
32.6
|
1.0
|
HD3
|
B:ARG651
|
3.2
|
46.3
|
1.0
|
NH2
|
B:ARG732
|
3.2
|
25.4
|
1.0
|
N
|
B:ARG651
|
3.3
|
27.6
|
1.0
|
HB3
|
B:ARG651
|
3.3
|
38.9
|
1.0
|
CG
|
B:ARG651
|
3.3
|
33.9
|
1.0
|
CZ
|
B:ARG732
|
3.5
|
26.8
|
1.0
|
HH11
|
B:ARG732
|
3.6
|
31.4
|
1.0
|
CD
|
B:ARG651
|
3.7
|
38.6
|
1.0
|
CB
|
B:ARG651
|
3.7
|
32.4
|
1.0
|
HG13
|
B:ILE650
|
3.7
|
34.6
|
1.0
|
HE1
|
B:MET674
|
3.7
|
38.9
|
1.0
|
CZ
|
B:ARG651
|
3.8
|
41.1
|
1.0
|
CG
|
B:PRO672
|
3.9
|
28.9
|
1.0
|
HH21
|
B:ARG732
|
4.0
|
30.4
|
1.0
|
CA
|
B:ILE650
|
4.0
|
27.2
|
1.0
|
HG2
|
B:PRO672
|
4.0
|
34.7
|
1.0
|
O
|
B:VAL649
|
4.1
|
25.8
|
1.0
|
CA
|
B:ARG651
|
4.1
|
28.5
|
1.0
|
C
|
B:ILE650
|
4.1
|
26.2
|
1.0
|
HG3
|
B:ARG651
|
4.1
|
40.7
|
1.0
|
NE
|
B:ARG651
|
4.2
|
39.5
|
1.0
|
HE2
|
B:MET674
|
4.3
|
38.9
|
1.0
|
CE
|
B:MET674
|
4.4
|
32.4
|
1.0
|
CG1
|
B:ILE650
|
4.5
|
28.9
|
1.0
|
HD2
|
B:ARG651
|
4.6
|
46.3
|
1.0
|
HG12
|
B:ILE650
|
4.6
|
34.6
|
1.0
|
HB2
|
B:ARG651
|
4.6
|
38.9
|
1.0
|
HE3
|
B:MET674
|
4.7
|
38.9
|
1.0
|
HB3
|
B:PRO672
|
4.7
|
31.0
|
1.0
|
CB
|
B:PRO672
|
4.8
|
25.9
|
1.0
|
HA
|
B:ARG651
|
4.8
|
34.2
|
1.0
|
HB2
|
B:PRO672
|
4.8
|
31.0
|
1.0
|
NE
|
B:ARG732
|
4.8
|
26.9
|
1.0
|
CB
|
B:ILE650
|
4.9
|
26.6
|
1.0
|
NH2
|
B:ARG651
|
4.9
|
38.1
|
1.0
|
C
|
B:VAL649
|
4.9
|
23.9
|
1.0
|
HD3
|
B:PRO672
|
4.9
|
32.7
|
1.0
|
O
|
B:ARG651
|
4.9
|
29.7
|
1.0
|
N
|
B:ILE650
|
4.9
|
23.8
|
1.0
|
CD
|
B:PRO672
|
5.0
|
27.3
|
1.0
|
HE
|
B:ARG651
|
5.0
|
47.4
|
1.0
|
|
Chlorine binding site 6 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 6 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl902
b:24.1
occ:1.00
|
H
|
B:LYS820
|
2.4
|
29.1
|
1.0
|
HD2
|
B:PRO802
|
2.7
|
28.5
|
1.0
|
HD2
|
B:LYS820
|
2.9
|
40.6
|
1.0
|
HA
|
B:LEU819
|
3.1
|
28.5
|
1.0
|
HD23
|
B:LEU819
|
3.1
|
24.2
|
1.0
|
HD13
|
A:LEU688
|
3.1
|
37.5
|
1.0
|
HB2
|
B:LYS820
|
3.2
|
32.0
|
1.0
|
HA
|
B:TYR801
|
3.2
|
28.4
|
1.0
|
N
|
B:LYS820
|
3.3
|
24.3
|
1.0
|
O
|
B:HOH1009
|
3.4
|
24.8
|
1.0
|
HD11
|
A:LEU688
|
3.4
|
37.5
|
1.0
|
HZ2
|
B:TRP791
|
3.6
|
26.6
|
1.0
|
CD
|
B:PRO802
|
3.6
|
23.8
|
1.0
|
H
|
B:TYR801
|
3.7
|
28.3
|
1.0
|
HD22
|
B:LEU819
|
3.7
|
24.2
|
1.0
|
CD1
|
A:LEU688
|
3.7
|
31.2
|
1.0
|
HG3
|
B:LYS820
|
3.7
|
36.5
|
1.0
|
CD
|
B:LYS820
|
3.8
|
33.8
|
1.0
|
CD2
|
B:LEU819
|
3.8
|
20.1
|
1.0
|
CB
|
B:LYS820
|
3.9
|
26.6
|
1.0
|
CA
|
B:LEU819
|
3.9
|
23.7
|
1.0
|
HG2
|
B:PRO802
|
3.9
|
31.4
|
1.0
|
CG
|
B:LYS820
|
4.0
|
30.4
|
1.0
|
CZ2
|
B:TRP791
|
4.0
|
22.2
|
1.0
|
HD3
|
B:PRO802
|
4.0
|
28.5
|
1.0
|
HD12
|
A:LEU688
|
4.1
|
37.5
|
1.0
|
CA
|
B:TYR801
|
4.1
|
23.7
|
1.0
|
C
|
B:LEU819
|
4.1
|
23.8
|
1.0
|
CA
|
B:LYS820
|
4.2
|
27.0
|
1.0
|
HB3
|
B:LEU819
|
4.2
|
28.9
|
1.0
|
CG
|
B:PRO802
|
4.3
|
26.1
|
1.0
|
N
|
B:TYR801
|
4.3
|
23.6
|
1.0
|
HZ2
|
B:LYS820
|
4.3
|
43.6
|
1.0
|
HD3
|
B:LYS820
|
4.4
|
40.6
|
1.0
|
HE3
|
B:LYS820
|
4.4
|
41.2
|
1.0
|
HD21
|
B:LEU819
|
4.5
|
24.2
|
1.0
|
CB
|
B:LEU819
|
4.5
|
24.1
|
1.0
|
HG3
|
B:PRO802
|
4.5
|
31.4
|
1.0
|
HD1
|
B:TYR801
|
4.5
|
28.6
|
1.0
|
HH2
|
B:TRP791
|
4.5
|
27.0
|
1.0
|
N
|
B:PRO802
|
4.5
|
23.6
|
1.0
|
CH2
|
B:TRP791
|
4.6
|
22.5
|
1.0
|
CE
|
B:LYS820
|
4.6
|
34.3
|
1.0
|
CE2
|
B:TRP791
|
4.7
|
21.5
|
1.0
|
HD22
|
A:LEU688
|
4.7
|
36.2
|
1.0
|
O
|
B:ARG818
|
4.7
|
22.9
|
1.0
|
O
|
B:LYS820
|
4.8
|
27.7
|
1.0
|
HB3
|
B:LYS820
|
4.8
|
32.0
|
1.0
|
CG
|
B:LEU819
|
4.8
|
23.0
|
1.0
|
HE1
|
B:TRP791
|
4.8
|
28.7
|
1.0
|
C
|
B:TYR801
|
4.8
|
26.0
|
1.0
|
HH
|
B:TYR812
|
4.9
|
31.4
|
1.0
|
NZ
|
B:LYS820
|
4.9
|
36.3
|
1.0
|
HD21
|
A:LEU688
|
4.9
|
36.2
|
1.0
|
CD1
|
B:TYR801
|
4.9
|
23.9
|
1.0
|
HA
|
B:LYS820
|
4.9
|
32.4
|
1.0
|
C
|
B:LYS820
|
5.0
|
28.0
|
1.0
|
HG2
|
B:LYS820
|
5.0
|
36.5
|
1.0
|
CG
|
A:LEU688
|
5.0
|
31.5
|
1.0
|
|
Chlorine binding site 7 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 7 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl903
b:43.3
occ:1.00
|
H
|
B:LEU589
|
2.5
|
40.7
|
1.0
|
HH22
|
B:ARG584
|
2.6
|
49.2
|
1.0
|
HB2
|
B:LEU589
|
3.2
|
44.7
|
1.0
|
HA
|
B:ILE588
|
3.2
|
41.5
|
1.0
|
HH12
|
B:ARG584
|
3.3
|
47.7
|
1.0
|
N
|
B:LEU589
|
3.3
|
33.9
|
1.0
|
NH2
|
B:ARG584
|
3.5
|
41.0
|
1.0
|
HG
|
B:LEU589
|
3.5
|
46.2
|
1.0
|
HD12
|
B:LEU589
|
3.8
|
52.0
|
1.0
|
CB
|
B:LEU589
|
3.9
|
37.3
|
1.0
|
NH1
|
B:ARG584
|
4.0
|
39.7
|
1.0
|
HH21
|
B:ARG584
|
4.0
|
49.2
|
1.0
|
CA
|
B:ILE588
|
4.1
|
34.6
|
1.0
|
CG
|
B:LEU589
|
4.1
|
38.5
|
1.0
|
O
|
B:LEU587
|
4.1
|
36.4
|
1.0
|
CA
|
B:LEU589
|
4.1
|
34.5
|
1.0
|
HG23
|
B:ILE588
|
4.1
|
39.5
|
1.0
|
C
|
B:ILE588
|
4.2
|
32.8
|
1.0
|
CZ
|
B:ARG584
|
4.2
|
43.6
|
1.0
|
HD13
|
B:ILE588
|
4.3
|
48.5
|
1.0
|
O
|
B:LEU589
|
4.3
|
33.5
|
1.0
|
CD1
|
B:LEU589
|
4.4
|
43.4
|
1.0
|
HD12
|
B:ILE588
|
4.7
|
48.5
|
1.0
|
HB3
|
B:LEU589
|
4.7
|
44.7
|
1.0
|
C
|
B:LEU589
|
4.7
|
31.6
|
1.0
|
HH11
|
B:ARG584
|
4.8
|
47.7
|
1.0
|
CG2
|
B:ILE588
|
4.8
|
32.9
|
1.0
|
HG22
|
B:ILE588
|
4.8
|
39.5
|
1.0
|
C
|
B:LEU587
|
4.9
|
35.8
|
1.0
|
HD11
|
B:LEU589
|
4.9
|
52.0
|
1.0
|
HA
|
B:LEU589
|
4.9
|
41.5
|
1.0
|
N
|
B:ILE588
|
4.9
|
32.8
|
1.0
|
CD1
|
B:ILE588
|
5.0
|
40.4
|
1.0
|
|
Chlorine binding site 8 out
of 8 in 4mh7
Go back to
Chlorine Binding Sites List in 4mh7
Chlorine binding site 8 out
of 8 in the Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Crystal Structure of the Catalytic Domain of the Proto-Oncogene Tyrosine-Protein Kinase Mer in Complex with Inhibitor UNC1896 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl904
b:47.5
occ:1.00
|
HD2
|
B:TYR682
|
3.5
|
31.6
|
1.0
|
HA
|
B:TYR676
|
3.6
|
29.9
|
1.0
|
HD1
|
B:TYR676
|
3.8
|
37.7
|
1.0
|
O
|
B:TYR676
|
3.8
|
27.0
|
1.0
|
HE2
|
B:TYR682
|
4.1
|
33.2
|
1.0
|
HD2
|
B:TYR685
|
4.1
|
37.1
|
1.0
|
HB3
|
B:TYR676
|
4.2
|
28.8
|
1.0
|
CD2
|
B:TYR682
|
4.3
|
26.3
|
1.0
|
CA
|
B:TYR676
|
4.4
|
25.0
|
1.0
|
CD1
|
B:TYR676
|
4.4
|
31.4
|
1.0
|
HG3
|
B:PRO692
|
4.4
|
35.6
|
1.0
|
C
|
B:TYR676
|
4.5
|
24.2
|
1.0
|
CE2
|
B:TYR682
|
4.6
|
27.7
|
1.0
|
CB
|
B:TYR676
|
4.7
|
24.0
|
1.0
|
HG2
|
B:PRO692
|
4.8
|
35.6
|
1.0
|
HD3
|
B:PRO692
|
4.8
|
37.5
|
1.0
|
HE2
|
B:TYR685
|
4.8
|
34.6
|
1.0
|
CG
|
B:TYR676
|
4.9
|
27.4
|
1.0
|
CD2
|
B:TYR685
|
4.9
|
30.9
|
1.0
|
|
Reference:
W.Zhang,
A.L.Mciver,
M.A.Stashko,
D.Deryckere,
B.R.Branchford,
D.Hunter,
D.Kireev,
M.J.Miley,
J.Norris-Drouin,
W.M.Stewart,
M.Lee,
S.Sather,
Y.Zhou,
J.A.Di Paola,
M.Machius,
W.P.Janzen,
H.S.Earp,
D.K.Graham,
S.V.Frye,
X.Wang.
Discovery of Mer Specific Tyrosine Kinase Inhibitors For the Treatment and Prevention of Thrombosis. J.Med.Chem. V. 56 9693 2013.
ISSN: ISSN 0022-2623
PubMed: 24219778
DOI: 10.1021/JM4013888
Page generated: Sun Jul 21 19:51:37 2024
|