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Chlorine in PDB 4miv: Crystal Structure of Sulfamidase, Crystal Form L

Enzymatic activity of Crystal Structure of Sulfamidase, Crystal Form L

All present enzymatic activity of Crystal Structure of Sulfamidase, Crystal Form L:
3.10.1.1;

Protein crystallography data

The structure of Crystal Structure of Sulfamidase, Crystal Form L, PDB code: 4miv was solved by N.S.Sidhu, I.Uson, K.Schreiber, K.Proepper, S.Becker, G.M.Sheldrick, J.Gaertner, R.Kraetzner, R.Steinfeld, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.85 / 2.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 102.930, 211.450, 108.350, 90.00, 102.69, 90.00
R / Rfree (%) 21.6 / 24.5

Other elements in 4miv:

The structure of Crystal Structure of Sulfamidase, Crystal Form L also contains other interesting chemical elements:

Calcium (Ca) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Sulfamidase, Crystal Form L (pdb code 4miv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Sulfamidase, Crystal Form L, PDB code: 4miv:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4miv

Go back to Chlorine Binding Sites List in 4miv
Chlorine binding site 1 out of 2 in the Crystal Structure of Sulfamidase, Crystal Form L


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sulfamidase, Crystal Form L within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl609

b:43.7
occ:1.00
O B:HOH743 2.9 30.7 1.0
O A:HOH747 3.0 36.9 1.0
NE2 A:HIS97 3.3 28.8 1.0
N B:ASP102 3.4 36.2 1.0
CD2 A:HIS97 3.6 29.6 1.0
CA B:PHE101 3.8 31.0 1.0
CB B:PHE101 3.9 30.3 1.0
CD1 B:PHE101 3.9 30.9 1.0
O B:HOH723 4.0 27.3 1.0
C B:PHE101 4.1 31.4 1.0
CB B:ASP102 4.1 40.5 1.0
CG B:ASP102 4.2 46.3 1.0
CE1 A:HIS97 4.3 29.6 1.0
CA B:ASP102 4.3 39.2 1.0
CG B:PHE101 4.4 29.9 1.0
OD1 B:ASP102 4.5 42.9 1.0
OD2 B:ASP102 4.5 46.7 1.0
CG A:HIS97 4.6 29.4 1.0
O B:HOH812 4.8 47.4 1.0
CZ B:PHE336 4.9 40.5 1.0
CE1 B:PHE336 4.9 41.3 1.0
ND1 A:HIS97 4.9 28.1 1.0

Chlorine binding site 2 out of 2 in 4miv

Go back to Chlorine Binding Sites List in 4miv
Chlorine binding site 2 out of 2 in the Crystal Structure of Sulfamidase, Crystal Form L


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Sulfamidase, Crystal Form L within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl609

b:65.0
occ:1.00
NZ C:LYS393 2.8 69.7 1.0
O D:HOH784 3.3 34.6 1.0
NH2 D:ARG428 3.7 66.6 1.0
CE C:LYS393 3.7 50.1 1.0
CE1 D:TYR432 3.8 33.8 1.0
CD C:LYS393 4.2 44.1 1.0
CD1 D:TYR432 4.2 29.0 1.0
CZ D:TYR432 4.2 31.2 1.0
OH D:TYR432 4.6 33.0 1.0
CZ D:ARG428 4.7 76.9 1.0
CG D:TYR432 4.8 30.4 1.0
CE2 D:TYR432 4.8 30.9 1.0
NH1 D:ARG428 5.0 58.1 1.0

Reference:

N.S.Sidhu, K.Schreiber, K.Proepper, S.Becker, I.Uson, G.M.Sheldrick, J.Gaertner, R.Kraetzner, R.Steinfeld. Structure of Sulfamidase Provides Insight Into the Molecular Pathology of Mucopolysaccharidosis Iiia Acta Crystallogr.,Sect.D V. D70 1321.
ISSN: ISSN 0907-4449
Page generated: Sat Dec 12 10:55:54 2020

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