Atomistry » Chlorine » PDB 4mdq-4mks » 4mjq
Atomistry »
  Chlorine »
    PDB 4mdq-4mks »
      4mjq »

Chlorine in PDB 4mjq: E. Coli Sliding Clamp in Complex with Bromfenac

Enzymatic activity of E. Coli Sliding Clamp in Complex with Bromfenac

All present enzymatic activity of E. Coli Sliding Clamp in Complex with Bromfenac:
2.7.7.7;

Protein crystallography data

The structure of E. Coli Sliding Clamp in Complex with Bromfenac, PDB code: 4mjq was solved by Z.Yin, A.J.Oakley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.98 / 1.73
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 40.993, 65.512, 73.438, 73.03, 85.29, 85.65
R / Rfree (%) 18.5 / 21.8

Other elements in 4mjq:

The structure of E. Coli Sliding Clamp in Complex with Bromfenac also contains other interesting chemical elements:

Bromine (Br) 1 atom
Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the E. Coli Sliding Clamp in Complex with Bromfenac (pdb code 4mjq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the E. Coli Sliding Clamp in Complex with Bromfenac, PDB code: 4mjq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4mjq

Go back to Chlorine Binding Sites List in 4mjq
Chlorine binding site 1 out of 2 in the E. Coli Sliding Clamp in Complex with Bromfenac


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of E. Coli Sliding Clamp in Complex with Bromfenac within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:39.0
occ:1.00
NE A:ARG105 3.1 12.1 1.0
NH2 A:ARG105 3.8 14.3 1.0
OE2 B:GLU301 3.9 17.3 0.5
CD B:GLU301 3.9 15.7 0.5
CB B:GLU303 3.9 11.7 1.0
CZ A:ARG105 3.9 13.0 1.0
OE1 B:GLU301 4.0 17.6 0.5
CD A:ARG105 4.0 11.1 1.0
CB A:ARG105 4.1 10.2 1.0
OE1 B:GLU303 4.1 17.0 1.0
CD B:GLU303 4.3 14.4 1.0
CG B:GLU301 4.4 14.9 0.5
CG A:ARG105 4.7 10.6 1.0
CG B:GLU303 4.7 12.8 1.0
OE2 B:GLU303 4.8 15.4 1.0
N B:GLU303 4.9 10.8 1.0

Chlorine binding site 2 out of 2 in 4mjq

Go back to Chlorine Binding Sites List in 4mjq
Chlorine binding site 2 out of 2 in the E. Coli Sliding Clamp in Complex with Bromfenac


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of E. Coli Sliding Clamp in Complex with Bromfenac within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl404

b:22.9
occ:1.00
O B:HIS175 3.6 22.1 1.0
CA B:ARG176 3.6 16.6 1.0
O B:VAL360 3.7 14.7 1.0
CG1 B:VAL247 3.8 30.4 1.0
C B:ARG176 3.8 16.4 1.0
C B:HIS175 3.8 20.2 1.0
CG B:MET362 3.8 24.4 0.5
N B:LEU177 3.8 16.2 1.0
N B:ARG176 3.9 17.8 1.0
CB B:LEU177 4.0 16.0 1.0
CG1 B:VAL360 4.1 15.9 1.0
CG B:MET362 4.1 21.0 0.5
SD B:MET362 4.3 28.3 0.5
SD B:MET362 4.3 22.4 0.5
CB B:VAL360 4.4 15.9 1.0
C B:VAL360 4.4 15.6 1.0
O B:ARG176 4.4 16.1 1.0
CA B:LEU177 4.5 15.9 1.0
CA B:HIS175 4.7 21.6 1.0
OG1 B:THR172 4.8 17.1 1.0
N B:HIS175 4.9 21.8 1.0
N B:MET362 4.9 18.6 1.0
CE B:MET362 5.0 27.1 0.5
CB B:ARG176 5.0 16.6 1.0

Reference:

Z.Yin, Y.Wang, L.R.Whittell, S.Jergic, M.Liu, E.Harry, N.E.Dixon, M.J.Kelso, J.L.Beck, A.J.Oakley. Dna Replication Is the Target For the Antibacterial Effects of Nonsteroidal Anti-Inflammatory Drugs. Chem.Biol. V. 21 481 2014.
ISSN: ISSN 1074-5521
PubMed: 24631121
DOI: 10.1016/J.CHEMBIOL.2014.02.009
Page generated: Sat Dec 12 10:56:03 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy