Atomistry » Chlorine » PDB 4ml5-4ms0 » 4mr0
Atomistry »
  Chlorine »
    PDB 4ml5-4ms0 »
      4mr0 »

Chlorine in PDB 4mr0: Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae

Protein crystallography data

The structure of Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae, PDB code: 4mr0 was solved by K.Ponnuraj, D.S.J.Beulin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.95
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 60.590, 126.080, 63.480, 90.00, 99.60, 90.00
R / Rfree (%) 20.4 / 22.2

Other elements in 4mr0:

The structure of Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae also contains other interesting chemical elements:

Manganese (Mn) 8 atoms
Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae (pdb code 4mr0). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae, PDB code: 4mr0:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4mr0

Go back to Chlorine Binding Sites List in 4mr0
Chlorine binding site 1 out of 2 in the Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl703

b:47.7
occ:1.00
O A:HOH1043 2.9 40.2 1.0
NZ A:LYS401 3.4 27.5 1.0
CE A:LYS401 3.8 19.6 1.0
OD1 A:ASN399 3.8 17.3 1.0
ND2 A:ASN399 4.1 15.6 1.0
CG A:ASN399 4.3 16.6 1.0
O A:HOH1074 4.3 48.6 1.0
O A:HOH1086 4.4 31.6 1.0
O A:HOH943 4.7 44.4 1.0
O A:HOH874 4.9 40.6 1.0

Chlorine binding site 2 out of 2 in 4mr0

Go back to Chlorine Binding Sites List in 4mr0
Chlorine binding site 2 out of 2 in the Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl703

b:56.6
occ:1.00
O B:HOH1036 3.0 43.7 1.0
NZ B:LYS401 3.3 25.1 1.0
OD1 B:ASN399 3.7 24.0 1.0
CE B:LYS401 3.8 21.8 1.0
ND2 B:ASN399 4.3 22.6 1.0
CG B:ASN399 4.3 20.1 1.0
O B:HOH967 4.4 32.3 1.0
O B:HOH1025 4.5 41.4 1.0
O B:HOH1023 4.9 39.1 1.0
O B:HOH850 5.0 22.3 1.0

Reference:

D.S.J.Beulin, M.Yamaguchi, S.Kawabata, K.Ponnuraj. Crystal Structure of Pfba, A Surface Adhesin of Streptococcus Pneumoniae, Provides Hints Into Its Interaction with Fibronectin Int.J.Biol.Macromol. V. 64C 168 2013.
ISSN: ISSN 0141-8130
PubMed: 24321492
DOI: 10.1016/J.IJBIOMAC.2013.11.035
Page generated: Sun Jul 21 20:08:56 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy