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Chlorine in PDB 4mvt: Crystal Structure of Sumo E3 Ligase PIAS3

Protein crystallography data

The structure of Crystal Structure of Sumo E3 Ligase PIAS3, PDB code: 4mvt was solved by A.Dong, J.Hu, Y.Li, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, Y.Tong, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.04 / 2.30
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 55.450, 85.440, 89.530, 83.08, 86.57, 86.14
R / Rfree (%) 23.8 / 27

Other elements in 4mvt:

The structure of Crystal Structure of Sumo E3 Ligase PIAS3 also contains other interesting chemical elements:

Zinc (Zn) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Sumo E3 Ligase PIAS3 (pdb code 4mvt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Sumo E3 Ligase PIAS3, PDB code: 4mvt:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4mvt

Go back to Chlorine Binding Sites List in 4mvt
Chlorine binding site 1 out of 2 in the Crystal Structure of Sumo E3 Ligase PIAS3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Sumo E3 Ligase PIAS3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:29.3
occ:1.00
N B:ASN296 3.3 26.6 1.0
N A:ASN296 3.3 25.5 1.0
O B:HOH633 3.5 33.8 1.0
NE2 B:HIS299 3.5 27.2 1.0
NE2 A:HIS299 3.6 30.1 1.0
CD2 B:HIS299 3.6 26.7 1.0
CD2 A:HIS299 3.6 29.4 1.0
CA B:ARG295 3.8 25.4 1.0
CA A:ARG295 3.9 26.0 1.0
CB A:ASN296 3.9 22.3 1.0
CB B:ASN296 3.9 22.7 1.0
CG B:ARG295 4.0 29.3 1.0
CG A:ARG295 4.0 29.1 1.0
C B:ARG295 4.0 27.9 1.0
C A:ARG295 4.1 28.2 1.0
O B:HOH625 4.1 25.5 1.0
CA B:ASN296 4.2 26.7 1.0
CA A:ASN296 4.2 25.3 1.0
CB B:ARG295 4.4 23.5 1.0
CB A:ARG295 4.5 22.9 1.0
O B:ILE294 4.6 33.2 1.0
O A:ILE294 4.6 29.4 1.0
NH1 B:ARG295 4.6 35.0 1.0
NH1 A:ARG295 4.6 29.4 1.0
CE1 B:HIS299 4.8 27.3 1.0
CE1 A:HIS299 4.9 30.2 1.0
N B:ARG295 4.9 26.3 1.0
N A:ARG295 5.0 26.8 1.0
CG B:HIS299 5.0 26.7 1.0
CG A:HIS299 5.0 28.3 1.0

Chlorine binding site 2 out of 2 in 4mvt

Go back to Chlorine Binding Sites List in 4mvt
Chlorine binding site 2 out of 2 in the Crystal Structure of Sumo E3 Ligase PIAS3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Sumo E3 Ligase PIAS3 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl502

b:29.3
occ:1.00
N D:ASN296 3.3 26.1 1.0
N C:ASN296 3.3 25.0 1.0
O C:HOH618 3.5 39.2 1.0
CD2 D:HIS299 3.6 34.8 1.0
NE2 D:HIS299 3.6 35.5 1.0
NE2 C:HIS299 3.6 34.1 1.0
CD2 C:HIS299 3.6 33.8 1.0
CB D:ASN296 3.8 20.2 1.0
CA D:ARG295 3.8 26.6 1.0
CB C:ASN296 3.9 19.4 1.0
CA C:ARG295 3.9 25.8 1.0
O C:HOH630 4.0 38.3 1.0
O D:HOH636 4.0 30.2 1.0
CG C:ARG295 4.0 29.1 1.0
C D:ARG295 4.1 29.8 1.0
CG D:ARG295 4.1 30.4 1.0
C C:ARG295 4.1 29.6 1.0
CA D:ASN296 4.2 26.3 1.0
CA C:ASN296 4.2 25.3 1.0
CB D:ARG295 4.5 23.5 1.0
CB C:ARG295 4.5 23.0 1.0
O C:ILE294 4.5 33.1 1.0
O D:ILE294 4.6 30.4 1.0
NH1 D:ARG295 4.7 34.9 1.0
NH1 C:ARG295 4.8 40.9 1.0
N D:ARG295 4.9 27.5 1.0
CE1 D:HIS299 4.9 35.8 1.0
CG D:HIS299 4.9 34.0 1.0
CE1 C:HIS299 4.9 34.1 1.0
N C:ARG295 5.0 27.0 1.0
CG C:HIS299 5.0 32.8 1.0

Reference:

J.Hu, A.Dong, Y.Li, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, Y.Tong, Structural Genomics Consortium (Sgc). Crystal Structure of Sumo E3 Ligase PIAS3 To Be Published.
Page generated: Sat Dec 12 10:56:56 2020

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