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Chlorine in PDB 4n1t: Struture of Human MTH1 in Complex with TH287

Enzymatic activity of Struture of Human MTH1 in Complex with TH287

All present enzymatic activity of Struture of Human MTH1 in Complex with TH287:
3.6.1.55; 3.6.1.56;

Protein crystallography data

The structure of Struture of Human MTH1 in Complex with TH287, PDB code: 4n1t was solved by R.P-A.Berntsson, A.Jemth, R.Gustafsson, L.M.Svensson, T.Helleday, P.Stenmark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.65 / 1.60
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 60.378, 66.321, 36.136, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 20.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Struture of Human MTH1 in Complex with TH287 (pdb code 4n1t). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Struture of Human MTH1 in Complex with TH287, PDB code: 4n1t:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4n1t

Go back to Chlorine Binding Sites List in 4n1t
Chlorine binding site 1 out of 2 in the Struture of Human MTH1 in Complex with TH287


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Struture of Human MTH1 in Complex with TH287 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:23.8
occ:1.00
CL1 A:2GD201 0.0 23.8 1.0
C09 A:2GD201 1.7 18.0 1.0
C11 A:2GD201 2.6 16.6 1.0
C08 A:2GD201 2.7 17.8 1.0
CL2 A:2GD201 3.0 17.7 1.0
O A:THR8 3.2 8.7 1.0
N A:GLY37 3.4 10.2 1.0
C A:GLY36 3.7 10.2 1.0
CD2 A:TYR7 3.7 10.8 1.0
CA A:GLY37 3.9 10.5 1.0
C05 A:2GD201 3.9 15.2 1.0
C07 A:2GD201 3.9 18.6 1.0
CA A:GLY36 4.0 9.9 1.0
CB A:TYR7 4.1 9.4 1.0
CG A:TYR7 4.3 10.2 1.0
O A:GLY36 4.3 10.9 1.0
C A:THR8 4.3 8.6 1.0
C06 A:2GD201 4.4 16.0 1.0
O A:HOH409 4.4 35.9 1.0
O A:GLY37 4.5 10.4 1.0
C A:GLY37 4.5 11.1 1.0
O A:HOH408 4.5 32.0 1.0
CD1 A:LEU9 4.5 8.8 1.0
CE2 A:TYR7 4.7 11.8 1.0
CE A:MET81 4.8 14.1 1.0
N A:THR8 4.8 9.4 1.0
CB A:LEU9 4.9 8.2 1.0
N A:GLY36 4.9 9.3 1.0

Chlorine binding site 2 out of 2 in 4n1t

Go back to Chlorine Binding Sites List in 4n1t
Chlorine binding site 2 out of 2 in the Struture of Human MTH1 in Complex with TH287


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Struture of Human MTH1 in Complex with TH287 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:17.7
occ:1.00
CL2 A:2GD201 0.0 17.7 1.0
C11 A:2GD201 1.7 16.6 1.0
C05 A:2GD201 2.7 15.2 1.0
C09 A:2GD201 2.7 18.0 1.0
C04 A:2GD201 3.0 12.8 1.0
CL1 A:2GD201 3.0 23.8 1.0
N03 A:2GD201 3.0 11.6 1.0
CG1 A:VAL83 3.5 7.0 1.0
CG2 A:VAL83 3.9 7.0 1.0
C06 A:2GD201 3.9 16.0 1.0
C08 A:2GD201 3.9 17.8 1.0
CD1 A:LEU9 3.9 8.8 1.0
C13 A:2GD201 4.0 11.8 1.0
CD2 A:LEU9 4.0 8.6 1.0
C02 A:2GD201 4.1 10.8 1.0
CB A:LEU9 4.1 8.2 1.0
CG A:LEU9 4.3 8.6 1.0
CE A:MET81 4.3 14.1 1.0
CB A:VAL83 4.3 7.1 1.0
C07 A:2GD201 4.4 18.6 1.0
ND2 A:ASN33 4.5 10.7 1.0
CE2 A:PHE72 4.6 8.0 1.0
O A:THR8 4.7 8.7 1.0
N01 A:2GD201 4.8 11.0 1.0
C14 A:2GD201 4.8 11.1 1.0
N17 A:2GD201 4.9 10.4 1.0

Reference:

H.Gad, T.Koolmeister, A.S.Jemth, S.Eshtad, S.A.Jacques, C.E.Strom, L.M.Svensson, N.Schultz, T.Lundback, B.O.Einarsdottir, A.Saleh, C.Gokturk, P.Baranczewski, R.Svensson, R.P.Berntsson, R.Gustafsson, K.Stromberg, K.Sanjiv, M.C.Jacques-Cordonnier, M.Desroses, A.L.Gustavsson, R.Olofsson, F.Johansson, E.J.Homan, O.Loseva, L.Brautigam, L.Johansson, A.Hoglund, A.Hagenkort, T.Pham, M.Altun, F.Z.Gaugaz, S.Vikingsson, B.Evers, M.Henriksson, K.S.Vallin, O.A.Wallner, L.G.Hammarstrom, E.Wiita, I.Almlof, C.Kalderen, H.Axelsson, T.Djureinovic, J.C.Puigvert, M.Haggblad, F.Jeppsson, U.Martens, C.Lundin, B.Lundgren, I.Granelli, A.J.Jensen, P.Artursson, J.A.Nilsson, P.Stenmark, M.Scobie, U.W.Berglund, T.Helleday. MTH1 Inhibition Eradicates Cancer By Preventing Sanitation of the Dntp Pool. Nature V. 508 215 2014.
ISSN: ISSN 0028-0836
PubMed: 24695224
DOI: 10.1038/NATURE13181
Page generated: Sat Dec 12 10:57:39 2020

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