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Chlorine in PDB 4n6d: Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site

Protein crystallography data

The structure of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site, PDB code: 4n6d was solved by M.W.Vetting, N.F.Al Obaidi, M.Stead, J.D.Attonito, A.Scott Glenn, S.Chowdhury, B.Evans, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.98 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.703, 68.249, 108.687, 90.00, 90.00, 90.00
R / Rfree (%) 14.5 / 18.4

Other elements in 4n6d:

The structure of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site also contains other interesting chemical elements:

Iodine (I) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site (pdb code 4n6d). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site, PDB code: 4n6d:

Chlorine binding site 1 out of 1 in 4n6d

Go back to Chlorine Binding Sites List in 4n6d
Chlorine binding site 1 out of 1 in the Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl403

b:18.7
occ:1.00
HE21 A:GLN66 2.4 29.0 1.0
HH A:TYR68 2.5 12.9 1.0
HB3 A:SER33 2.8 10.3 1.0
HB2 A:GLN66 3.0 15.2 1.0
OH A:TYR68 3.0 10.8 1.0
HE1 A:TYR68 3.1 14.2 1.0
NE2 A:GLN66 3.2 24.1 1.0
HG2 A:GLN66 3.4 27.1 1.0
CB A:SER33 3.7 8.6 1.0
CB A:GLN66 3.7 12.7 1.0
HE22 A:GLN66 3.8 29.0 1.0
CE1 A:TYR68 3.8 11.9 1.0
CZ A:TYR68 3.8 9.7 1.0
HB3 A:GLN66 3.8 15.2 1.0
CG A:GLN66 3.8 22.6 1.0
HB2 A:SER33 3.9 10.3 1.0
HA A:SER33 4.0 8.8 1.0
CD A:GLN66 4.0 24.1 1.0
CA A:SER33 4.3 7.3 1.0
O A:HOH666 4.6 26.6 1.0
N A:SER33 4.7 7.4 1.0
OG A:SER33 4.7 11.7 1.0
HG A:SER33 4.7 14.1 1.0
HG3 A:GLN66 4.8 27.1 1.0
H A:GLN66 4.9 13.1 1.0
H A:SER33 4.9 8.8 1.0
HG A:SER31 4.9 21.9 1.0

Reference:

M.W.Vetting, N.F.Al Obaidi, M.Stead, J.D.Attonito, A.Scott Glenn, S.Chowdhury, B.Evans, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo. Crystal Structure of A Trap Periplasmic Solute Binding Protein From Desulfovibrio Salexigens DSM2638 (DESAL_3247), Target Efi-510112, Phased with I3C, Open Complex, C-Terminus of Symmetry Mate Bound in Ligand Binding Site To Be Published.
Page generated: Sun Jul 21 20:28:46 2024

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