Atomistry » Chlorine » PDB 4mya-4n94 » 4n7s
Atomistry »
  Chlorine »
    PDB 4mya-4n94 »
      4n7s »

Chlorine in PDB 4n7s: Crystal Structure of TSE3-TSI3 Complex with Zinc Ion

Protein crystallography data

The structure of Crystal Structure of TSE3-TSI3 Complex with Zinc Ion, PDB code: 4n7s was solved by G.J.Shang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.80 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.196, 93.254, 171.790, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 23.6

Other elements in 4n7s:

The structure of Crystal Structure of TSE3-TSI3 Complex with Zinc Ion also contains other interesting chemical elements:

Zinc (Zn) 7 atoms
Calcium (Ca) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of TSE3-TSI3 Complex with Zinc Ion (pdb code 4n7s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of TSE3-TSI3 Complex with Zinc Ion, PDB code: 4n7s:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4n7s

Go back to Chlorine Binding Sites List in 4n7s
Chlorine binding site 1 out of 2 in the Crystal Structure of TSE3-TSI3 Complex with Zinc Ion


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of TSE3-TSI3 Complex with Zinc Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:60.9
occ:1.00
CA A:VAL38 3.2 39.2 1.0
C A:VAL38 3.3 41.1 1.0
N A:ASP40 3.4 32.2 1.0
N A:ALA41 3.4 41.8 1.0
N A:PRO39 3.6 41.8 1.0
CB A:VAL38 3.6 45.0 1.0
CB A:ASP40 3.6 41.8 1.0
O A:VAL38 3.7 38.5 1.0
CD A:PRO39 3.8 40.5 1.0
CA A:ASP40 3.9 39.6 1.0
CG1 A:VAL38 4.0 39.3 1.0
C A:ASP40 4.2 41.9 1.0
CB A:ALA41 4.2 35.1 1.0
C A:PRO39 4.3 33.4 1.0
CA A:ALA41 4.4 40.6 1.0
CG A:PRO39 4.5 40.3 1.0
CA A:PRO39 4.5 40.7 1.0
O A:ASN37 4.6 43.5 1.0
N A:VAL38 4.6 36.7 1.0
CG A:ASP40 4.8 43.2 1.0

Chlorine binding site 2 out of 2 in 4n7s

Go back to Chlorine Binding Sites List in 4n7s
Chlorine binding site 2 out of 2 in the Crystal Structure of TSE3-TSI3 Complex with Zinc Ion


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of TSE3-TSI3 Complex with Zinc Ion within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl504

b:59.7
occ:1.00
C C:GLY126 3.6 37.8 1.0
N C:ALA128 3.7 41.1 1.0
O C:GLY126 3.7 37.7 1.0
CE C:LYS227 3.8 54.4 1.0
NZ C:LYS227 3.8 56.7 1.0
N C:ALA129 3.8 45.0 1.0
CA C:GLY126 3.8 36.0 1.0
N C:PHE127 4.0 37.4 1.0
CB C:ALA129 4.1 55.0 1.0
CB C:ALA128 4.4 40.6 1.0
CA C:ALA128 4.4 42.3 1.0
CA C:PHE127 4.4 33.5 1.0
C C:PHE127 4.4 40.2 1.0
C C:ALA128 4.6 47.1 1.0
CA C:ALA129 4.6 46.0 1.0
O C:ALA122 4.8 36.2 1.0
CD C:LYS227 4.9 50.2 1.0
N C:GLY126 5.0 35.4 1.0

Reference:

D.Lu, G.Shang, H.Zhang, Q.Yu, X.Cong, J.Yuan, F.He, C.Zhu, Y.Zhao, K.Yin, Y.Chen, J.Hu, X.Zhang, Z.Yuan, S.Xu, W.Hu, H.Cang, L.Gu. Structural Insights Into the T6SS Effector Protein TSE3 and the TSE3-TSI3 Complex From Pseudomonas Aeruginosa Reveal A Calcium-Dependent Membrane-Binding Mechanism Mol.Microbiol. V. 92 1092 2014.
ISSN: ISSN 0950-382X
PubMed: 24724564
DOI: 10.1111/MMI.12616
Page generated: Sat Dec 12 10:57:52 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy