Atomistry » Chlorine » PDB 4n99-4ngq » 4ng8
Atomistry »
  Chlorine »
    PDB 4n99-4ngq »
      4ng8 »

Chlorine in PDB 4ng8: Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K.

Enzymatic activity of Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K.

All present enzymatic activity of Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K.:
3.2.1.17;

Protein crystallography data

The structure of Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K., PDB code: 4ng8 was solved by P.Benas, L.Legrand, M.Ries-Kautt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 55.82 / 1.09
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 78.935, 78.935, 37.065, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 17.6

Other elements in 4ng8:

The structure of Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K. also contains other interesting chemical elements:

Caesium (Cs) 9 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K. (pdb code 4ng8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K., PDB code: 4ng8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4ng8

Go back to Chlorine Binding Sites List in 4ng8
Chlorine binding site 1 out of 2 in the Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl208

b:13.8
occ:0.98
OH A:TYR23 3.0 11.9 1.0
O A:HOH301 3.1 21.9 0.9
CZ A:TYR23 3.6 10.9 1.0
CE2 A:TYR23 3.7 11.2 1.0
CA A:GLY104 4.2 11.5 1.0
O A:ARG21 4.6 13.9 1.0
N A:GLY104 4.7 11.4 1.0
CE1 A:TYR23 4.8 10.8 1.0
CD2 A:TYR23 4.9 11.3 1.0
O A:HOH454 5.0 22.0 1.0

Chlorine binding site 2 out of 2 in 4ng8

Go back to Chlorine Binding Sites List in 4ng8
Chlorine binding site 2 out of 2 in the Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Dialyzed Hew Lysozyme Batch Crystallized in 1.9 M Cscl and Collected at 100 K. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl209

b:16.7
occ:0.86
OG A:SER24 3.1 16.4 1.0
N A:GLY26 3.1 11.8 1.0
CA A:GLY26 3.5 11.7 1.0
CB A:SER24 3.5 13.3 1.0
CA A:GLN121 3.6 16.1 1.0
N A:GLN121 3.9 14.5 1.0
CB A:GLN121 4.1 19.9 1.0
CD1 A:ILE124 4.1 25.6 1.0
O A:VAL120 4.2 13.8 1.0
C A:VAL120 4.2 13.5 1.0
N A:LEU25 4.2 13.1 1.0
CG2 A:VAL120 4.3 16.6 1.0
CG1 A:ILE124 4.3 19.5 1.0
C A:LEU25 4.3 12.1 1.0
C A:SER24 4.4 13.0 1.0
C A:GLY26 4.5 10.4 1.0
N A:ASN27 4.6 11.0 1.0
CA A:SER24 4.6 12.8 1.0
CA A:LEU25 4.7 12.8 1.0
C A:GLN121 4.8 15.0 1.0
O A:SER24 4.9 13.3 1.0
CB A:VAL120 5.0 14.9 1.0
CG2 A:ILE124 5.0 19.4 1.0

Reference:

P.Benas, N.Auzeil, L.Legrand, F.Brachet, A.Regazzetti, M.Ries-Kautt. Weak Protein-Cationic Co-Ion Interactions Addressed By X-Ray Crystallography and Mass Spectrometry. Acta Crystallogr.,Sect.D V. 70 2217 2014.
ISSN: ISSN 0907-4449
PubMed: 25084340
DOI: 10.1107/S1399004714011304
Page generated: Sun Jul 21 22:12:37 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy